Concepedia

Plasmid Reconstruction

Plasmid Reconstruction is a computational method in metagenomics that specifically identifies and assembles complete or near-complete plasmid sequences from complex microbial communities sequenced via shotgun metagenomic approaches.

82

Publications

4.2K

Citations

545

Authors

248

Institutions

Publications per year

2017–2026

34

Parents

Publications

82

On the (im)possibility of reconstructing plasmids from whole-genome short-read sequencing data

Sergio Arredondo-Alonso, Rob J. L. Willems, Willem van Schaik et al. · Microbial Genomics · 2017 · 295 citations · Full text

, , +17

Recursive Directional Ligation by Plasmid Reconstruction Allows Rapid and Seamless Cloning of Oligomeric Genes

Jonathan R. McDaniel, J. Andrew MacKay, Felipe García Quiroz et al. · Biomacromolecules · 2010 · 261 citations · Full text

, , +17

Man-made microbial resistances in built environments

Alexander Mahnert, Christine Moissl‐Eichinger, Markus Zojer et al. · Nature Communications · 2019 · 215 citations · Full text

, , +17

Genetic analysis of the alginate biosynthetic gene cluster of <i>Pseudomonas aeruginosa</i> shows evidence of an operonic structure

Chetan E. Chitnis, Dennis E. Ohman · Molecular Microbiology · 1993 · 183 citations

, , +17

Plasmid Flux in Escherichia coli ST131 Sublineages, Analyzed by Plasmid Constellation Network (PLACNET), a New Method for Plasmid Reconstruction from Whole Genome Sequences

Val F. Lanza, María de Toro, M. Pilar Garcillán‐Barcia et al. · PLoS Genetics · 2014 · 174 citations · Full text

, , +15

1–5 of 82

Authors

545

  1. RJ
    Rob J. L. Willems

    University Medical Center Utrecht, Netherlands

    4 publications · 389 citations

    4

    h-index

  2. AC
    Anita C. Schürch

    University Medical Center Utrecht, Netherlands

    4 publications · 389 citations

    4

    h-index

  3. SA
    Sergio Arredondo-Alonso

    University Medical Center Utrecht, Netherlands

    4 publications · 389 citations

    4

    h-index

  4. JJ
    John J. Nash

    Purdue University West Lafayette, United States

    3 publications · 50 citations

    3

    h-index

  5. MP
    Marı́a Pérez-Vázquez

    Instituto de Salud Carlos III, Spain

    3 publications · 124 citations

    3

    h-index

1–5 of 545

Institutions

248

  1. University Medical Center Utrecht

    Utrecht, The Netherlands

    5 h-index

    19 publications

    1.7K citations

  2. University of Oslo

    Oslo, Norway

    4 h-index

    4 publications

    124 citations

  3. University of Oxford

    Oxford, United Kingdom

    3 h-index

    16 publications

    1.2K citations

  4. University of Helsinki

    Helsinki, Finland

    3 h-index

    6 publications

    207 citations

  5. Wellcome Sanger Institute

    Cambridge, United Kingdom

    3 h-index

    4 publications

    214 citations

  6. Public Health Agency of Canada

    Ottawa, Canada

    3 h-index

    23 publications

    356 citations

  7. Instituto de Salud Carlos III

    Madrid, Spain

    3 h-index

    18 publications

    1.1K citations

  8. Utrecht University

    Utrecht, The Netherlands

    3 h-index

    13 publications

    542 citations

1–8 of 248

Venues

  1. Plasmid

    9 publications · 280 citations

    9

    h-index

  2. Journal of Bacteriology

    JB · 5 publications · 218 citations

    5

    h-index

  3. Genome Announcements

    GenomeA · 4 publications · 90 citations

    4

    h-index

  4. Molecular and General Genetics MGG

    4 publications · 92 citations

    4

    h-index

  5. Gene

    4 publications · 218 citations

    4

    h-index

1–5