Concepedia

Peptide Sequence Search

Peptide Sequence Search is a computational method in bioinformatics that identifies and characterizes peptide sequences within protein databases by matching experimental mass spectrometry data against theoretical or predicted peptide entries, distinguished from broader protein identification techniques by its focus on short, linear amino acid subsequences as the primary unit of analysis.

863

Publications

100.3K

Citations

3.7K

Authors

1.1K

Institutions

Publications per year

2017–2026

219

Parents

Publications

863

Andromeda: A Peptide Search Engine Integrated into the MaxQuant Environment

Jürgen Cox, Nadin Neuhauser, Annette Michalski et al. · Journal of Proteome Research · 2011 · 5.9K citations · Full text

, , +17

Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites

Henrik Nielsen, Jacob Engelbrecht, Søren Brunak et al. · Protein Engineering Design and Selection · 1997 · 5.4K citations · Full text

, , +17

MMseqs2 enables sensitive protein sequence searching for the analysis of massive data sets

Martin Steinegger, Johannes Söding · Nature Biotechnology · 2017 · 5.1K citations

, , +14

SignalP 6.0 predicts all five types of signal peptides using protein language models

Nature Biotechnology · 2022 · 2.8K citations · Full text

, , +17

TANDEM: matching proteins with tandem mass spectra

Robertson Craig, Ronald C. Beavis · Bioinformatics · 2004 · 2.6K citations · Full text

, , +17

1–5 of 863

Authors

3.7K

  1. GP
    Gajendra P. S. Raghava

    Institute of Microbial Technology, India

    14 publications · 1.9K citations

    13

    h-index

  2. PA
    Pavel A. Pevzner

    University of California San Diego, United States

    10 publications · 1.3K citations

    10

    h-index

  3. GB
    Geert Baggerman

    KU Leuven, Belgium

    9 publications · 389 citations

    9

    h-index

  4. SH
    Si‐Min He

    Institute of Computing Technology, China

    9 publications · 945 citations

    9

    h-index

  5. LS
    Liliane Schoofs

    KU Leuven, Belgium

    9 publications · 395 citations

    9

    h-index

1–5 of 3.7K

Institutions

1.1K

  1. University of Washington

    Seattle, United States

    19 h-index

    59 publications

    9K citations

  2. Harvard University

    Cambridge, United States

    16 h-index

    59 publications

    3.7K citations

  3. Ghent University

    Ghent, Belgium

    15 h-index

    53 publications

    3.5K citations

  4. National Institutes of Health

    Bethesda, United States

    14 h-index

    54 publications

    14.6K citations

  5. University of California San Diego

    San Diego, United States

    14 h-index

    47 publications

    7.8K citations

  6. Institute of Microbial Technology

    Chandigarh, India

    13 h-index

    74 publications

    14.5K citations

  7. Chinese Academy of Sciences

    Beijing, China

    13 h-index

    112 publications

    10.3K citations

  8. European Bioinformatics Institute

    Cambridge, United Kingdom

    12 h-index

    34 publications

    7.5K citations

1–8 of 1.1K

Venues

  1. Journal of Proteome Research

    JPR · 85 publications · 13.8K citations

    43

    h-index

  2. Bioinformatics

    45 publications · 7.2K citations

    31

    h-index

  3. PROTEOMICS

    52 publications · 5.2K citations

    30

    h-index

  4. Molecular & Cellular Proteomics

    MCP · 34 publications · 4.1K citations

    29

    h-index

  5. Analytical Chemistry

    29 publications · 4.1K citations

    26

    h-index

1–5