Concepedia

Pathway Knowledge Representation

Pathway Knowledge Representation is a formal computational or conceptual framework that specifies the structured encoding of biological pathway information, distinguishing itself by enabling the explicit, machine-readable articulation of molecular interactions, regulatory relationships, and functional annotations within a defined biological context.

105

Publications

7.7K

Citations

441

Authors

207

Institutions

Publications per year

2017–2026

16

Parents

Publications

105

Reactome pathway analysis: a high-performance in-memory approach

Antonio Fabregat, Konstantinos Sidiropoulos, Guilherme Viteri et al. · BMC Bioinformatics · 2017 · 927 citations · Full text

, , +13

Reactome knowledgebase of human biological pathways and processes

Lisa Matthews, Gopal Gopinath, Marc Gillespie et al. · Nucleic Acids Research · 2008 · 886 citations · Full text

, , +12

Reactome: a knowledge base of biologic pathways and processes

Imre Västrik, Peter D’Eustachio, Esther Schmidt et al. · Genome biology · 2007 · 661 citations · Full text

, , +12

WikiPathways 2024: next generation pathway database

Ayushi Agrawal, Hasan Balcı, Kristina Hanspers et al. · Nucleic Acids Research · 2023 · 427 citations · Full text

, , +15

The Organic Codes: an introduction to semantic biology

Romeu Cardoso Guimarães · Genetics and Molecular Biology · 2003 · 260 citations · Full text

, , +14

1–5 of 105

Authors

441

  1. PD
    Peter D’Eustachio

    New York University, United States

    11 publications · 2.8K citations

    11

    h-index

  2. ED
    Emek Demir

    Oregon Health & Science University, United States

    9 publications · 305 citations

    9

    h-index

  3. SM
    Stuart Moodie

    European Bioinformatics Institute, United Kingdom

    8 publications · 247 citations

    8

    h-index

  4. HM
    Huaiyu Mi

    University of Southern California, United States

    8 publications · 253 citations

    8

    h-index

  5. NL
    Nicolas Le Novère

    European Bioinformatics Institute, United Kingdom

    7 publications · 375 citations

    7

    h-index

1–5 of 441

Institutions

207

  1. European Bioinformatics Institute

    Cambridge, United Kingdom

    11 h-index

    65 publications

    26.5K citations

  2. Ontario Institute for Cancer Research

    Toronto, Canada

    10 h-index

    13 publications

    2.3K citations

  3. SRI International

    Menlo Park, United States

    9 h-index

    30 publications

    2.2K citations

  4. University of Southern California

    Los Angeles, United States

    8 h-index

    16 publications

    437 citations

  5. Babraham Institute

    Cambridge, United Kingdom

    7 h-index

    8 publications

    569 citations

  6. The University of Tokyo

    Tokyo, Japan

    7 h-index

    22 publications

    1.1K citations

  7. University of Manchester

    Manchester, United Kingdom

    7 h-index

    14 publications

    1.1K citations

  8. New York University

    New York, United States

    7 h-index

    8 publications

    2.7K citations

1–8 of 207

Venues

  1. Bioinformatics

    18 publications · 892 citations

    17

    h-index

  2. BMC Bioinformatics

    7 publications · 1.2K citations

    7

    h-index

  3. PubMed

    Repository · 7 publications · 196 citations

    7

    h-index

  4. Nucleic Acids Research

    5 publications · 1.7K citations

    5

    h-index

  5. 4

    h-index

1–5