Concepedia

Pathway Integration

Pathway Integration is a computational framework that synthesizes biological pathway data from multiple, heterogeneous sources into a unified, consistent representation by resolving structural, semantic, and contextual discrepancies across pathway databases, curation practices, annotation standards, and reconstruction methodologies.

55

Publications

7.2K

Citations

348

Authors

105

Institutions

Publications per year

2017–2026

17

Parents

Publications

55

Pathview: an R/Bioconductor package for pathway-based data integration and visualization

Weijun Luo, Cory Brouwer · Bioinformatics · 2013 · 2.4K citations · Full text

, , +11

Pathway Commons, a web resource for biological pathway data

Ethan Cerami, Emek Demir, Igor Rodchenkov et al. · Nucleic Acids Research · 2010 · 1.2K citations · Full text

, , +15

WikiPathways: Pathway Editing for the People

Alexander R. Pico, Thomas Kelder, Martijn van Iersel et al. · PLoS Biology · 2008 · 731 citations · Full text

, , +14

Pathview Web: user friendly pathway visualization and data integration

Weijun Luo, Gaurav Pant, Yeshvant K. Bhavnasi et al. · Nucleic Acids Research · 2017 · 470 citations · Full text

, , +17

GeneWays: a system for extracting, analyzing, visualizing, and integrating molecular pathway data

Andrey Rzhetsky, Ivan Iossifov, Tomohiro Koike et al. · Journal of Biomedical Informatics · 2003 · 292 citations

, , +12

1–5 of 55

Authors

348

  1. ÖB
    Özgün Babur

    Oregon Health & Science University, United States

    4 publications · 1.4K citations

    4

    h-index

  2. ED
    Emek Demir

    Oregon Health & Science University, United States

    4 publications · 1.3K citations

    4

    h-index

  3. CS
    Chris Sander

    Memorial Sloan Kettering Cancer Center, United States

    3 publications · 1.2K citations

    3

    h-index

  4. RÇ
    Rengül Çetin-Atalay

    Bilkent University, Türkiye

    2 publications · 213 citations

    2

    h-index

  5. CP
    Chiara Pastrello

    University of Toronto, Canada

    2 publications · 150 citations

    2

    h-index

1–5 of 348

Institutions

105

  1. University of Toronto

    Toronto, Canada

    3 h-index

    12 publications

    10.7K citations

  2. Institute of Neuroimmunology of the Slovak Academy of Sciences

    Bratislava, Slovakia

    2 h-index

    2 publications

    150 citations

  3. Fraunhofer Institute for Algorithms and Scientific Computing

    Sankt Augustin, Germany

    2 h-index

    15 publications

    207 citations

  4. University of California San Diego

    San Diego, United States

    2 h-index

    3 publications

    123 citations

  5. Bonn Aachen International Center for Information Technology

    Bonn, Germany

    2 h-index

    13 publications

    181 citations

  6. UConn Health

    Farmington, United States

    2 h-index

    5 publications

    142 citations

  7. University of Göttingen

    Göttingen, Germany

    2 h-index

    7 publications

    294 citations

  8. Gladstone Institutes

    San Francisco, United States

    2 h-index

    5 publications

    2.3K citations

1–8 of 105

Venues

  1. Bioinformatics

    10 publications · 2.9K citations

    10

    h-index

  2. Nucleic Acids Research

    6 publications · 1.8K citations

    6

    h-index

  3. BMC Bioinformatics

    3 publications · 82 citations

    3

    h-index

  4. Journal of Bacteriology

    JB · 2 publications · 78 citations

    2

    h-index

  5. PLoS Computational Biology

    2 publications · 80 citations

    2

    h-index

1–5