Concepedia

Pan-genome Assembly

Pan-Genome Assembly is a computational framework that integrates multiple individual genome sequences of a species to construct a comprehensive reference structure representing the entire gene repertoire, including core and accessory genomic regions, thereby capturing the full genetic diversity within a population.

129

Publications

20.8K

Citations

1.5K

Authors

545

Institutions

Publications per year

2017–2026

108

Parents

Publications

129

Roary: rapid large-scale prokaryote pan genome analysis

Andrew J. Page, Carla Cummins, Martin Hunt et al. · Bioinformatics · 2015 · 5.9K citations · Full text

, , +13

Genome analysis of multiple pathogenic isolates of <i>Streptococcus agalactiae</i> : Implications for the microbial “pan-genome”

Hervé Tettelin, Vega Masignani, Michael J. Cieslewicz et al. · Proceedings of the National Academy of Sciences · 2005 · 2.7K citations · Full text

, , +15

Eight high-quality genomes reveal pan-genome architecture and ecotype differentiation of Brassica napus

Jia‐Ming Song, Zhilin Guan, Jianlin Hu et al. · Nature Plants · 2020 · 844 citations · Full text

, , +17

Insights into the Maize Pan-Genome and Pan-Transcriptome  

Candice N. Hirsch, Jillian M. Foerster, James M. Johnson et al. · The Plant Cell · 2014 · 606 citations · Full text

, , +17

The barley pan-genome reveals the hidden legacy of mutation breeding

Murukarthick Jayakodi, Sudharsan Padmarasu, Georg Haberer et al. · Nature · 2020 · 591 citations · Full text

, , +17

1–5 of 129

Authors

1.5K

  1. NS
    Nils Stein

    Leibniz-Institut für Pflanzengenetik und Kulturpflanzenforschung (IPK), Germany

    4 publications · 1.2K citations

    6

    h-index

  2. MS
    M. Spannagl

    Helmholtz Zentrum München, Germany

    3 publications · 1K citations

    5

    h-index

  3. MM
    Martin Mascher

    Leibniz-Institut für Pflanzengenetik und Kulturpflanzenforschung (IPK), Germany

    4 publications · 1.1K citations

    5

    h-index

  4. TL
    Thomas Lux

    Helmholtz Zentrum München, Germany

    3 publications · 1K citations

    5

    h-index

  5. DE
    David Edwards

    The University of Western Australia, Australia

    5 publications · 745 citations

    5

    h-index

1–5 of 1.5K

Institutions

545

  1. Chinese Academy of Agricultural Sciences

    Beijing, China

    18 h-index

    142 publications

    25.4K citations

  2. Ministry of Agriculture and Rural Affairs

    Beijing, China

    14 h-index

    103 publications

    15.6K citations

  3. Huazhong Agricultural University

    Wuhan, China

    11 h-index

    59 publications

    17.8K citations

  4. Chinese Academy of Sciences

    Beijing, China

    11 h-index

    28 publications

    2.8K citations

  5. Agricultural Genomics Institute at Shenzhen

    Shenzhen, China

    10 h-index

    72 publications

    12.9K citations

  6. Institute of Crop Sciences

    Beijing, China

    10 h-index

    54 publications

    11.1K citations

  7. Northwest A&F University

    Yangling, China

    7 h-index

    55 publications

    4.1K citations

  8. University of Chinese Academy of Sciences

    Beijing, China

    7 h-index

    11 publications

    1K citations

1–8 of 545

Venues

  1. Nature Communications

    7 publications · 1.3K citations

    8

    h-index

  2. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 6 publications · 426 citations

    8

    h-index

  3. BMC Genomics

    5 publications · 264 citations

    6

    h-index

  4. Genome biology

    5 publications · 773 citations

    6

    h-index

  5. GigaScience

    5 publications · 280 citations

    5

    h-index

1–5