Concepedia

Microbiome Functional Profiling

Microbiome Functional Profiling is a computational or analytical framework that characterizes the collective metabolic, enzymatic, and physiological capabilities of microbial communities within a given ecosystem, distinguishing it from taxonomic profiling by focusing on functional gene content and biochemical activities rather than microbial species composition.

64

Publications

7.6K

Citations

452

Authors

216

Institutions

Publications per year

2017–2026

56

Parents

Publications

64

MicrobiomeAnalyst: a web-based tool for comprehensive statistical, visual and meta-analysis of microbiome data

Achal Dhariwal, Jasmine Chong, Salam M. Habib et al. · Nucleic Acids Research · 2017 · 2K citations · Full text

, , +17

MicrobiomeAnalyst 2.0: comprehensive statistical, functional and integrative analysis of microbiome data

Yao Lü, Guangyan Zhou, Jessica Ewald et al. · Nucleic Acids Research · 2023 · 584 citations · Full text

, , +17

BugBase predicts organism-level microbiome phenotypes

Tonya Ward, J E Larson, Jeremy Meulemans et al. · bioRxiv (Cold Spring Harbor Laboratory) · 2017 · 492 citations · Full text

, , +16

Evaluating the Information Content of Shallow Shotgun Metagenomics

Benjamin Hillmann, Gabriel A. Al‐Ghalith, Robin Shields‐Cutler et al. · mSystems · 2018 · 484 citations · Full text

, , +14

Comparative Metagenomics Reveals Host Specific Metavirulomes and Horizontal Gene Transfer Elements in the Chicken Cecum Microbiome

Ani Qu, Jennifer M. Brulc, Melissa K. Wilson et al. · PLoS ONE · 2008 · 292 citations · Full text

, , +17

1–5 of 64

Authors

452

  1. RK
    Rob Knight

    University of California San Diego, United States

    4 publications · 1.2K citations

    4

    h-index

  2. DK
    Dan Knights

    University of Minnesota, United States

    3 publications · 1K citations

    3

    h-index

  3. SC
    Stefano Campanaro

    University of Padua, Italy

    2 publications · 201 citations

    2

    h-index

  4. MK
    Maria Kornienko

    United States Military Academy, United States

    2 publications · 133 citations

    2

    h-index

  5. SF
    Sarah Fansler

    Pacific Northwest National Laboratory, United States

    2 publications · 119 citations

    2

    h-index

1–5 of 452

Institutions

216

  1. University of California San Diego

    San Diego, United States

    5 h-index

    17 publications

    3.1K citations

  2. Chinese Academy of Sciences

    Beijing, China

    3 h-index

    6 publications

    100 citations

  3. Biotechnology Institute

    Washington D.C., United States

    3 h-index

    6 publications

    2K citations

  4. Pacific Northwest National Laboratory

    Richland, United States

    3 h-index

    20 publications

    1.2K citations

  5. University of Minnesota

    Minneapolis, United States

    3 h-index

    21 publications

    7.5K citations

  6. University of Washington

    Seattle, United States

    3 h-index

    4 publications

    505 citations

  7. Yale University

    New Haven, United States

    3 h-index

    5 publications

    428 citations

  8. Hospital Universitario Virgen del Rocío

    Seville, Spain

    2 h-index

    2 publications

    59 citations

1–8 of 216

Venues

  1. PLoS ONE

    4 publications · 531 citations

    4

    h-index

  2. Scientific Reports

    4 publications · 185 citations

    4

    h-index

  3. mSystems

    3 publications · 625 citations

    3

    h-index

  4. Microorganisms

    2 publications · 86 citations

    2

    h-index

  5. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 2 publications · 520 citations

    2

    h-index

1–5