Concepedia

Microbial Single-cell Genomics

Microbial Single-Cell Genomics is a specialized field within single-cell genomics that focuses on the isolation, sequencing, and analysis of genomic material from individual microbial cells to resolve genetic heterogeneity and functional potential within complex microbial communities.

120

Publications

12.1K

Citations

616

Authors

227

Institutions

Publications per year

2017–2026

56

Parents

Publications

120

Insights into the phylogeny and coding potential of microbial dark matter

Christian Rinke, Patrick Schwientek, Alexander Sczyrba et al. · Nature · 2013 · 2.4K citations · Full text

, , +17

Dissecting biological “dark matter” with single-cell genetic analysis of rare and uncultivated TM7 microbes from the human mouth

Yann Marcy, Cleber Ouverney, Elisabeth M. Bik et al. · Proceedings of the National Academy of Sciences · 2007 · 634 citations · Full text

, , +17

Microbial single-cell RNA sequencing by split-pool barcoding

Anna Kuchina, Leandra Brettner, Luana Paleologu et al. · Science · 2021 · 337 citations · Full text

, , +15

Obtaining genomes from uncultivated environmental microorganisms using FACS–based single-cell genomics

Christian Rinke, Janey Lee, Nandita Nath et al. · Nature Protocols · 2014 · 311 citations

, , +14

Genome of a Low-Salinity Ammonia-Oxidizing Archaeon Determined by Single-Cell and Metagenomic Analysis

Paul C. Blainey, Annika C. Mosier, Anastasia Potanina et al. · PLoS ONE · 2011 · 310 citations · Full text

, , +17

1–5 of 120

Authors

616

  1. TW
    Tanja Woyke

    Joint Genome Institute, United States

    18 publications · 3.9K citations

    17

    h-index

  2. RS
    Ramūnas Stepanauskas

    Bigelow Laboratory for Ocean Sciences, United States

    16 publications · 4.2K citations

    15

    h-index

  3. MH
    Masahito Hosokawa

    Waseda University, Japan

    9 publications · 496 citations

    9

    h-index

  4. HT
    Haruko Takeyama

    Waseda University, Japan

    8 publications · 474 citations

    8

    h-index

  5. YN
    Yohei Nishikawa

    Waseda University, Japan

    8 publications · 427 citations

    8

    h-index

1–5 of 616

Institutions

227

  1. Joint Genome Institute

    Berkeley, United States

    18 h-index

    98 publications

    34.9K citations

  2. Bigelow Laboratory for Ocean Sciences

    Boothbay, United States

    14 h-index

    46 publications

    11.4K citations

  3. Waseda University

    Tokyo, Japan

    10 h-index

    62 publications

    3.5K citations

  4. Stanford University

    Stanford, United States

    7 h-index

    21 publications

    5.9K citations

  5. Broad Institute

    Cambridge, United States

    7 h-index

    8 publications

    607 citations

  6. National Institute of Advanced Industrial Science and Technology

    Tsukuba, Japan

    6 h-index

    23 publications

    1.3K citations

  7. Harvard University

    Cambridge, United States

    5 h-index

    13 publications

    1.8K citations

  8. Lawrence Berkeley National Laboratory

    Berkeley, United States

    5 h-index

    28 publications

    1.4K citations

1–8 of 227

Venues

  1. Proceedings of the National Academy of Sciences

    PNAS · 20 publications · 2K citations

    19

    h-index

  2. The ISME Journal

    10 publications · 945 citations

    10

    h-index

  3. Frontiers in Microbiology

    8 publications · 392 citations

    8

    h-index

  4. Scientific Reports

    6 publications · 215 citations

    6

    h-index

  5. Science

    5 publications · 1.2K citations

    5

    h-index

1–5