Concepedia

Marker Gene Detection

Marker Gene Detection is a computational method in single-cell clustering that identifies differentially expressed genes uniquely associated with specific cell subpopulations to define their biological identity.

108

Publications

9.3K

Citations

581

Authors

210

Institutions

Publications per year

2017–2026

37

Parents

Publications

108

A step-by-step workflow for low-level analysis of single-cell RNA-seq data with Bioconductor

Aaron T. L. Lun, Davis J. McCarthy, John C. Marioni · F1000Research · 2016 · 1.8K citations · Full text

, , +17

Systematic improvement of amplicon marker gene methods for increased accuracy in microbiome studies

Daryl M. Gohl, Pajau Vangay, John Garbe et al. · Nature Biotechnology · 2016 · 865 citations

, , +17

A step-by-step workflow for low-level analysis of single-cell RNA-seq data

Aaron T. L. Lun, Davis J. McCarthy, John C. Marioni · F1000Research · 2016 · 822 citations · Full text

, , +17

IDTAXA: a novel approach for accurate taxonomic classification of microbiome sequences

Adithya Murali, Aniruddha Bhargava, Erik S. Wright · Microbiome · 2018 · 618 citations · Full text

, , +17

BugBase predicts organism-level microbiome phenotypes

Tonya Ward, J E Larson, Jeremy Meulemans et al. · bioRxiv (Cold Spring Harbor Laboratory) · 2017 · 492 citations · Full text

, , +16

1–5 of 108

Authors

581

  1. MA
    Miguel A. Andrade‐Navarro

    Johannes Gutenberg University Mainz, Germany

    2 publications · 25 citations

    2

    h-index

  2. ZK
    Zhensheng Kang

    Northwest A&F University, China

    2 publications · 32 citations

    2

    h-index

  3. AT
    Aaron T. L. Lun

    University of Cambridge, United Kingdom

    2 publications · 2.6K citations

    2

    h-index

  4. MS
    Monika Singh

    ICAR-National Bureau Of Plant Genetic Resources, India

    2 publications · 30 citations

    2

    h-index

  5. MA
    Mohamed A. M. Atia

    Agricultural Genetic Engineering Research Institute, Egypt

    2 publications · 74 citations

    2

    h-index

1–5 of 581

Institutions

210

  1. Chinese Academy of Sciences

    Beijing, China

    5 h-index

    18 publications

    745 citations

  2. University of Chinese Academy of Sciences

    Beijing, China

    4 h-index

    9 publications

    516 citations

  3. University of Minnesota

    Minneapolis, United States

    3 h-index

    22 publications

    14.8K citations

  4. University of Pittsburgh

    Pittsburgh, United States

    3 h-index

    17 publications

    3.8K citations

  5. Wellcome Sanger Institute

    Cambridge, United Kingdom

    3 h-index

    9 publications

    3.3K citations

  6. European Bioinformatics Institute

    Cambridge, United Kingdom

    3 h-index

    5 publications

    5.4K citations

  7. University of Wisconsin–Madison

    Madison, United States

    2 h-index

    3 publications

    1.2K citations

  8. Cancer Research UK Cambridge Center

    Cambridge, United Kingdom

    2 h-index

    4 publications

    5.3K citations

1–8 of 210

Venues

  1. Applied and Environmental Microbiology

    AEM · 5 publications · 144 citations

    5

    h-index

  2. Nucleic Acids Research

    5 publications · 164 citations

    5

    h-index

  3. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 4 publications · 642 citations

    4

    h-index

  4. Scientific Reports

    4 publications · 245 citations

    4

    h-index

  5. PubMed

    Repository · 4 publications · 458 citations

    4

    h-index

1–5