Concepedia

Loop Accuracy Assessment

Loop Accuracy Assessment is a computational metric used in structural biology to quantify the deviation between predicted and experimentally determined loop conformations in protein models, distinguished by its focus on local structural fidelity of solvent-exposed polypeptide segments.

18

Publications

710

Citations

48

Authors

33

Institutions

Publications per year

2017–2026

5

Parents

Publications

18

Loops In Proteins (LIP)--a comprehensive loop database for homology modelling

Elke Michalsky, Andrean Goede · Protein Engineering Design and Selection · 2003 · 112 citations

, , +15

Benchmarking the Accuracy of AlphaFold 2 in Loop Structure Prediction

Amy O. Stevens, Yi He · Biomolecules · 2022 · 102 citations · Full text

, , +12

Accurate Random Coil Chemical Shifts from an Analysis of Loop Regions in Native States of Proteins

Alfonso De Simone, Andrea Cavalli, Shang‐Te Danny Hsu et al. · Journal of the American Chemical Society · 2009 · 94 citations

, , +13

A method for validating the accuracy of NMR protein structures

Nicholas Fowler, Adnan Sljoka, Michael P. Williamson · Nature Communications · 2020 · 65 citations · Full text

, , +15

Accuracy and reliability of the scaling-relaxation method for loop closure: An evaluation based on extensive and multiple copy conformational samplings

Qiang Zheng, Donald J. Kyle · Proteins Structure Function and Bioinformatics · 1996 · 41 citations

, , +16

1–5 of 18

Authors

48

  1. CZ
    Chi Zhang

    University of Nebraska–Lincoln, United States

    2 publications · 56 citations

    2

    h-index

  2. SL
    Shide Liang

    University of Nebraska–Lincoln, United States

    2 publications · 56 citations

    2

    h-index

  3. CM
    Charlotte M. Deane

    University of Oxford, United Kingdom

    1 publications · 10 citations

    1

    h-index

  4. PB
    Pete Briglia

    1 publications · 28 citations

    1

    h-index

  5. YK
    Yasaman Karami

    Centre National de la Recherche Scientifique, France

    1 publications · 39 citations

    1

    h-index

1–5 of 48

Institutions

33

  1. The University of Osaka

    Osaka, Japan

    2 h-index

    4 publications

    94 citations

  2. University of Nebraska–Lincoln

    Lincoln, United States

    2 h-index

    2 publications

    56 citations

  3. Nova Research Company (United States)

    Bethesda, United States

    1 h-index

    1 publications

    41 citations

  4. Institut National de Physique Nucléaire et de Physique des Particules

    Paris, France

    1 h-index

    1 publications

    38 citations

  5. Biologie Computationnelle, Quantitative et Synthétique

    Paris, France

    1 h-index

    1 publications

    39 citations

  6. University of Sheffield

    Sheffield, United Kingdom

    1 h-index

    2 publications

    130 citations

  7. RIKEN Center for Advanced Intelligence Project

    Tokyo, Japan

    1 h-index

    1 publications

    65 citations

  8. Columbia University

    New York, United States

    1 h-index

    2 publications

    72 citations

1–8 of 33

Venues

  1. 3

    h-index

  2. Nature Communications

    1 publications · 65 citations

    1

    h-index

  3. 1

    h-index

  4. Journal of the American Chemical Society

    JACS · 1 publications · 94 citations

    1

    h-index

  5. Protein Engineering Design and Selection

    PEDS · 1 publications · 112 citations

    1

    h-index

1–5