Concepedia

Lineage Inference

Lineage Inference is a computational method in single-cell transcriptomics that reconstructs the developmental trajectories of cells by inferring ancestral relationships from gene expression profiles across individual cells.

245

Publications

32.2K

Citations

1.5K

Authors

608

Institutions

Publications per year

2017–2026

149

Parents

Publications

245

The single-cell transcriptional landscape of mammalian organogenesis

Junyue Cao, Malte Spielmann, Xiaojie Qiu et al. · Nature · 2019 · 4.8K citations

, , +14

Slingshot: cell lineage and pseudotime inference for single-cell transcriptomics

Kelly Street, Davide Risso, Russell B. Fletcher et al. · BMC Genomics · 2018 · 3.4K citations · Full text

, , +17

Single-cell transcriptional diversity is a hallmark of developmental potential

Gunsagar S. Gulati, Shaheen S. Sikandar, Daniel J. Wesche et al. · Science · 2020 · 1.6K citations · Full text

, , +17

Single-cell profiling of the developing mouse brain and spinal cord with split-pool barcoding

Alexander Rosenberg, Charles M. Roco, Richard A. Muscat et al. · Science · 2018 · 1.5K citations · Full text

, , +17

Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq

Barbara Treutlein, Douglas Brownfield, Angela Ruohao Wu et al. · Nature · 2014 · 1.5K citations · Full text

, , +14

1–5 of 245

Authors

1.5K

  1. KS
    Kelly Street

    University of California, Berkeley, United States

    6 publications · 4.6K citations

    6

    h-index

  2. SD
    Sandrine Dudoit

    University of California, Berkeley, United States

    6 publications · 4.6K citations

    6

    h-index

  3. CH
    Chieh Hubert Lin

    Carnegie Mellon University, United States

    4 publications · 168 citations

    4

    h-index

  4. FJ
    Fabian J. Theis

    Helmholtz Zentrum München, Germany

    4 publications · 98 citations

    4

    h-index

  5. HZ
    Hamim Zafar

    Rice University, United States

    4 publications · 323 citations

    4

    h-index

1–5 of 1.5K

Institutions

608

  1. Harvard University

    Cambridge, United States

    15 h-index

    46 publications

    8.5K citations

  2. Howard Hughes Medical Institute

    Chevy Chase, United States

    11 h-index

    24 publications

    17.4K citations

  3. ETH Zurich

    Zurich, Switzerland

    10 h-index

    33 publications

    1.1K citations

  4. Centre National de la Recherche Scientifique

    Paris, France

    9 h-index

    29 publications

    5K citations

  5. Stanford University

    Stanford, United States

    8 h-index

    65 publications

    42.7K citations

  6. Center for Systems Biology

    Boston, United States

    8 h-index

    18 publications

    6.2K citations

  7. University of California, Berkeley

    Berkeley, United States

    8 h-index

    34 publications

    28.6K citations

  8. Carnegie Mellon University

    Pittsburgh, United States

    7 h-index

    19 publications

    775 citations

1–8 of 608

Venues

  1. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 23 publications · 1.1K citations

    15

    h-index

  2. Nature Communications

    14 publications · 2.3K citations

    14

    h-index

  3. Bioinformatics

    9 publications · 269 citations

    9

    h-index

  4. Nucleic Acids Research

    8 publications · 553 citations

    8

    h-index

  5. Proceedings of the National Academy of Sciences

    PNAS · 7 publications · 274 citations

    7

    h-index

1–5