Concepedia

Interspersed Repeat Assembly

Interspersed Repeat Assembly is a computational method in genomics that reconstructs fragmented or dispersed repetitive sequences within a genome by identifying and aligning homologous repeat copies, thereby resolving their complex genomic organization distinct from tandem or simple repeat structures.

23

Publications

1.2K

Citations

180

Authors

60

Institutions

Publications per year

2017–2026

8

Parents

Publications

23

Long-read sequence and assembly of segmental duplications

Mitchell R. Vollger, Philip C. Dishuck, Melanie Sorensen et al. · Nature Methods · 2018 · 252 citations

, , +14

Unique Features of the Loblolly Pine (<i>Pinus taeda</i> L.) Megagenome Revealed Through Sequence Annotation

Jill Wegrzyn, John D Liechty, Kristian Stevens et al. · Genetics · 2014 · 216 citations · Full text

, , +15

Assembly of chromosome-scale contigs by efficiently resolving repetitive sequences with long reads

Huilong Du, Chengzhi Liang · Nature Communications · 2019 · 94 citations · Full text

, , +17

<tt>RePS: </tt>A Sequence Assembler That Masks Exact Repeats Identified from the Shotgun Data

Jun Wang, Gane Ka‐Shu Wong, Peixiang Ni et al. · Genome Research · 2002 · 72 citations · Full text

, , +16

A high-quality cucumber genome assembly enhances computational comparative genomics

Paweł Osipowski, Magdalena Pawełkowicz, Michał Wojcieszek et al. · Molecular Genetics and Genomics · 2019 · 60 citations · Full text

, , +17

1–5 of 23

Authors

180

  1. PJ
    Pieter J. de Jong

    Wellcome Sanger Institute, United Kingdom

    2 publications · 264 citations

    2

    h-index

  2. HD
    Huilong Du

    Institute of Genetics and Developmental Biology, China

    2 publications · 104 citations

    2

    h-index

  3. RK
    Richard K. Wilson

    Washington University in St. Louis, United States

    2 publications · 298 citations

    2

    h-index

  4. PB
    Philipp Bongartz

    Heidelberg Institute for Theoretical Studies, Germany

    2 publications · 53 citations

    2

    h-index

  5. CL
    Chengzhi Liang

    Chinese Academy of Sciences, China

    2 publications · 104 citations

    2

    h-index

1–5 of 180

Institutions

60

  1. Chinese Academy of Sciences

    Beijing, China

    3 h-index

    26 publications

    1.8K citations

  2. University of Georgia

    Athens, United States

    3 h-index

    6 publications

    159 citations

  3. University of Washington

    Seattle, United States

    2 h-index

    29 publications

    3.3K citations

  4. Institute of Genetics and Developmental Biology

    Beijing, China

    2 h-index

    4 publications

    208 citations

  5. University of California, Davis

    Davis, United States

    2 h-index

    13 publications

    2.5K citations

  6. Washington University in St. Louis

    St Louis, United States

    2 h-index

    19 publications

    902 citations

  7. Johns Hopkins University

    Baltimore, United States

    2 h-index

    7 publications

    662 citations

  8. State Key Laboratory of Plant Genomics

    Beijing, China

    2 h-index

    4 publications

    208 citations

1–8 of 60

Venues

  1. Genome Research

    GR · 3 publications · 166 citations

    3

    h-index

  2. Nucleic Acids Research

    2 publications · 80 citations

    2

    h-index

  3. BMC Bioinformatics

    2 publications · 40 citations

    2

    h-index

  4. Molecular Genetics and Genomics

    2 publications · 80 citations

    2

    h-index

  5. Chromosome Research

    1 publications · 11 citations

    1

    h-index

1–5