Concepedia

Interactive Single-cell Visualization

Interactive Single-Cell Visualization is a computational framework that enables real-time, user-driven exploration and dynamic representation of single-cell genomic data through interactive graphical interfaces, distinguishing it from static or automated visualization methods by prioritizing responsive, iterative analysis of high-dimensional biological datasets.

50

Publications

6.6K

Citations

269

Authors

104

Institutions

Publications per year

2017–2026

43

Parents

Publications

50

viSNE enables visualization of high dimensional single-cell data and reveals phenotypic heterogeneity of leukemia

El-ad David Amir, Kara L. Davis, Michelle D. Tadmor et al. · Nature Biotechnology · 2013 · 1.6K citations · Full text

, , +12

TISCH: a comprehensive web resource enabling interactive single-cell transcriptome visualization of tumor microenvironment

Dongqing Sun, Jin Wang, Ya Han et al. · Nucleic Acids Research · 2020 · 1.2K citations · Full text

, , +17

Galaxy HiCExplorer 3: a web server for reproducible Hi-C, capture Hi-C and single-cell Hi-C data analysis, quality control and visualization

Joachim Wolff, Leily Rabbani, Ralf Gilsbach et al. · Nucleic Acids Research · 2020 · 492 citations · Full text

, , +14

Cytofkit: A Bioconductor Package for an Integrated Mass Cytometry Data Analysis Pipeline

Hao Chen, Mai Chan Lau, Michael T. Wong et al. · PLoS Computational Biology · 2016 · 378 citations · Full text

, , +17

SPRING: a kinetic interface for visualizing high dimensional single-cell expression data

Caleb Weinreb, Samuel L. Wolock, Allon M. Klein · Bioinformatics · 2017 · 331 citations · Full text

, , +17

1–5 of 50

Authors

269

  1. BW
    Binbin Wang

    Tongji University, China

    2 publications · 1.2K citations

    2

    h-index

  2. JW
    Jin Wang

    Tongji University, China

    2 publications · 1.2K citations

    2

    h-index

  3. YY
    Yilv Yan

    Shanghai Pulmonary Hospital, China

    2 publications · 1.2K citations

    2

    h-index

  4. RH
    Roman Hillje

    European Institute of Oncology, Italy

    2 publications · 122 citations

    2

    h-index

  5. PV
    Peter V. Kharchenko

    Harvard University, United States

    2 publications · 101 citations

    2

    h-index

1–5 of 269

Institutions

104

  1. Harvard University

    Cambridge, United States

    7 h-index

    26 publications

    1.8K citations

  2. Broad Institute

    Cambridge, United States

    6 h-index

    22 publications

    1.5K citations

  3. SIB Swiss Institute of Bioinformatics

    Lausanne, Switzerland

    3 h-index

    9 publications

    712 citations

  4. Broad Center

    Los Angeles, United States

    3 h-index

    7 publications

    1.1K citations

  5. University of California, San Francisco

    San Francisco, United States

    3 h-index

    8 publications

    1.4K citations

  6. University of Milan

    Milan, Italy

    2 h-index

    2 publications

    122 citations

  7. Sichuan University

    Chengdu, China

    2 h-index

    2 publications

    1.2K citations

  8. Altos Labs

    San Francisco, United States

    2 h-index

    2 publications

    101 citations

1–8 of 104

Venues

  1. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 15 publications · 684 citations

    12

    h-index

  2. Bioinformatics

    8 publications · 1.4K citations

    8

    h-index

  3. Nucleic Acids Research

    3 publications · 1.7K citations

    3

    h-index

  4. NAR Genomics and Bioinformatics

    2 publications · 170 citations

    2

    h-index

  5. Bioinformatics Advances

    1 publications · 18 citations

    1

    h-index

1–5