Concepedia

Integration Benchmarking

Integration Benchmarking is a systematic evaluation framework that assesses and compares the performance, accuracy, and robustness of single-cell multi-omics integration methods by employing standardized datasets, metrics, and computational criteria to distinguish their relative effectiveness in preserving biological fidelity and technical reproducibility.

11

Publications

2.5K

Citations

53

Authors

28

Institutions

Publications per year

2017–2026

8

Parents

Publications

11

Benchmarking atlas-level data integration in single-cell genomics

Malte D. Luecken, Maren Büttner, Kridsadakorn Chaichoompu et al. · Nature Methods · 2021 · 1.4K citations · Full text

, , +17

Multi-omics single-cell data integration and regulatory inference with graph-linked embedding

Zhi‐Jie Cao, Ge Gao · Nature Biotechnology · 2022 · 603 citations · Full text

, , +17

Benchmarking atlas-level data integration in single-cell genomics

Malte D. Luecken, Maren Büttner, Kridsadakorn Chaichoompu et al. · bioRxiv (Cold Spring Harbor Laboratory) · 2020 · 122 citations · Full text

, , +17

Evaluation and comparison of multi-omics data integration methods for cancer subtyping

Ran Duan, Lin Gao, Yong Gao et al. · PLoS Computational Biology · 2021 · 120 citations · Full text

, , +17

Benchmarking strategies for cross-species integration of single-cell RNA sequencing data

Yuyao Song, Zhichao Miao, Alvis Brāzma et al. · Nature Communications · 2023 · 112 citations · Full text

, , +17

1–5 of 11

Authors

53

  1. MD
    Malte D. Luecken

    Helmholtz Zentrum München, Germany

    2 publications · 1.5K citations

    2

    h-index

  2. MC
    Maria Colomé‐Tatché

    University of Groningen, Netherlands

    2 publications · 1.5K citations

    2

    h-index

  3. ZM
    Zhichao Miao

    European Bioinformatics Institute, United Kingdom

    2 publications · 123 citations

    2

    h-index

  4. YS
    Yuyao Song

    Princess Margaret Cancer Centre, Canada

    2 publications · 123 citations

    2

    h-index

  5. MB
    Maren Büttner

    Helmholtz Zentrum München, Germany

    2 publications · 1.5K citations

    2

    h-index

1–5 of 53

Institutions

28

  1. European Bioinformatics Institute

    Cambridge, United Kingdom

    2 h-index

    8 publications

    492 citations

  2. Technical University of Munich

    Munich, Germany

    2 h-index

    5 publications

    4.5K citations

  3. Helmholtz Zentrum München

    Munich, Germany

    2 h-index

    17 publications

    13.7K citations

  4. University of Münster

    Münster, Germany

    2 h-index

    3 publications

    1.7K citations

  5. Isotopen Technologien München (Germany)

    Garching bei München, Germany

    1 h-index

    1 publications

    1.4K citations

  6. Xidian University

    Xi'an, China

    1 h-index

    11 publications

    1.3K citations

  7. University Hospital Heidelberg

    Heidelberg, Germany

    1 h-index

    1 publications

    1.4K citations

  8. Heidelberg University

    Heidelberg, Germany

    1 h-index

    1 publications

    1.4K citations

1–8 of 28

Venues

  1. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 2 publications · 133 citations

    2

    h-index

  2. Nature Biotechnology

    1 publications · 603 citations

    1

    h-index

  3. Briefings in Bioinformatics

    1 publications · 38 citations

    1

    h-index

  4. Nature Communications

    1 publications · 112 citations

    1

    h-index

  5. International Journal of Production Economics

    1 publications · 33 citations

    1

    h-index

1–5