Concepedia

High-throughput Rna-binding Profiling

High-Throughput RNA-Binding Profiling is a molecular biology methodology that enables the genome-wide, systematic identification and quantification of RNA-binding protein interactions with target RNAs at unprecedented scale and resolution through automated, parallelized experimental and computational techniques.

39

Publications

4K

Citations

266

Authors

88

Institutions

Publications per year

2017–2026

28

Parents

Publications

39

Robust transcriptome-wide discovery of RNA-binding protein binding sites with enhanced CLIP (eCLIP)

Eric L. Van Nostrand, Gabriel A. Pratt, A.A. Shishkin et al. · Nature Methods · 2016 · 1.6K citations

, , +14

RNA Bind-n-Seq: Quantitative Assessment of the Sequence and Structural Binding Specificity of RNA Binding Proteins

Nicole Lambert, Alex Robertson, Mohini Jangi et al. · Molecular Cell · 2014 · 440 citations · Full text

, , +17

Principles of RNA processing from analysis of enhanced CLIP maps for 150 RNA binding proteins

Eric L. Van Nostrand, Gabriel A. Pratt, Brian A. Yee et al. · Genome biology · 2020 · 248 citations · Full text

, , +16

Quantitative analysis of RNA-protein interactions on a massively parallel array reveals biophysical and evolutionary landscapes

Jason D. Buenrostro, Carlos L. Araya, Lauren Chircus et al. · Nature Biotechnology · 2014 · 241 citations · Full text

, , +15

Predicting dynamic cellular protein–RNA interactions by deep learning using in vivo RNA structures

Lei Sun, Kui Xu, Wenze Huang et al. · Cell Research · 2021 · 139 citations · Full text

, , +15

1–5 of 39

Authors

266

  1. GA
    Gabriel A. Pratt

    University of California San Diego, United States

    5 publications · 2K citations

    5

    h-index

  2. GY
    G Yeo

    University of California San Diego, United States

    5 publications · 2K citations

    5

    h-index

  3. CG
    Chelsea Gelboin-Burkhart

    University of California San Diego, United States

    5 publications · 2K citations

    5

    h-index

  4. SM
    Steven M. Blue

    University of California San Diego, United States

    5 publications · 2K citations

    5

    h-index

  5. TB
    Thai B. Nguyen

    University of California San Diego, United States

    5 publications · 2K citations

    5

    h-index

1–5 of 266

Institutions

88

  1. University of California San Diego

    San Diego, United States

    5 h-index

    70 publications

    21.5K citations

  2. Center for Life Sciences

    Beijing, China

    4 h-index

    20 publications

    1.6K citations

  3. Stanford University

    Stanford, United States

    3 h-index

    18 publications

    2.8K citations

  4. Institute for Systems Biology

    Seattle, United States

    3 h-index

    7 publications

    377 citations

  5. UConn Health

    Farmington, United States

    3 h-index

    3 publications

    293 citations

  6. National University of Singapore

    Singapore, Singapore

    3 h-index

    3 publications

    1.7K citations

  7. Tsinghua University

    Beijing, China

    3 h-index

    19 publications

    1.5K citations

  8. Howard Hughes Medical Institute

    Chevy Chase, United States

    3 h-index

    21 publications

    1.3K citations

1–8 of 88

Venues

  1. Methods in molecular biology

    Book series · 4 publications · 274 citations

    4

    h-index

  2. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 2 publications · 38 citations

    3

    h-index

  3. Nucleic Acids Research

    3 publications · 157 citations

    3

    h-index

  4. Nature Communications

    2 publications · 59 citations

    2

    h-index

  5. Nature Methods

    2 publications · 1.6K citations

    2

    h-index

1–5