Concepedia

Haplotype-based Selection Scans

Haplotype-Based Selection Scans is a computational method in population genetics that identifies genomic regions under recent positive selection by analyzing extended haplotype homozygosity or haplotype frequency differentiation, distinguishing it from allele frequency–based approaches through its sensitivity to the temporal dynamics and linkage structure of selected variants.

13

Publications

1.5K

Citations

69

Authors

47

Institutions

Publications per year

2017–2026

8

Parents

Publications

13

<i>rehh</i>: an R package to detect footprints of selection in genome-wide SNP data from haplotype structure

Mathieu Gautier, Renaud Vitalis · Bioinformatics · 2012 · 577 citations

, , +14

<scp>rehh</scp> 2.0: a reimplementation of the R package <scp>rehh</scp> to detect positive selection from haplotype structure

Mathieu Gautier, Alexander Klassmann, Renaud Vitalis · Molecular Ecology Resources · 2016 · 437 citations · Full text

, , +11

hapbin: An Efficient Program for Performing Haplotype-Based Scans for Positive Selection in Large Genomic Datasets: Fig. 1.

Colin MacLean, Neil Chue Hong, James Prendergast · Molecular Biology and Evolution · 2015 · 118 citations · Full text

, , +11

selscan 2.0: scanning for sweeps in unphased data

Zachary A. Szpiech · Bioinformatics · 2024 · 87 citations · Full text

, , +13

Population Genetics and Signatures of Selection in Early Neolithic European Farmers

Ainash Childebayeva, Adam B. Rohrlach, Rodrigo Barquera et al. · Molecular Biology and Evolution · 2022 · 53 citations · Full text

, , +17

1–5 of 13

Authors

69

  1. RV
    Renaud Vitalis

    Centre de Biologie pour la Gestion des Populations, France

    3 publications · 1K citations

    3

    h-index

  2. AK
    Alexander Klassmann

    University of Cologne, Germany

    2 publications · 460 citations

    2

    h-index

  3. ZA
    Zachary A. Szpiech

    University of California, San Francisco, United States

    2 publications · 116 citations

    2

    h-index

  4. MG
    Mathieu Gautier

    Centre de Biologie pour la Gestion des Populations, France

    2 publications · 460 citations

    2

    h-index

  5. AS
    András Szolek

    University of Tübingen, Germany

    1 publications · 53 citations

    1

    h-index

1–5 of 69

Institutions

47

  1. Centre National de la Recherche Scientifique

    Paris, France

    3 h-index

    4 publications

    702 citations

  2. Centre de Biologie pour la Gestion des Populations

    Montferrier-sur-Lez, France

    3 h-index

    6 publications

    2.1K citations

  3. University of Cologne

    Cologne, Germany

    2 h-index

    2 publications

    460 citations

  4. Pennsylvania State University

    State College, United States

    2 h-index

    2 publications

    116 citations

  5. Agropolis International

    Montpellier, France

    2 h-index

    4 publications

    2K citations

  6. Université de Bordeaux

    Bordeaux, France

    1 h-index

    2 publications

    106 citations

  7. LEIZA - Leibniz-Zentrum für Archäologie

    Mainz, Germany

    1 h-index

    1 publications

    53 citations

  8. University of Tübingen

    Tübingen, Germany

    1 h-index

    2 publications

    106 citations

1–8 of 47

Venues

  1. Molecular Biology and Evolution

    MBE · 3 publications · 191 citations

    3

    h-index

  2. Bioinformatics

    2 publications · 664 citations

    2

    h-index

  3. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 2 publications · 52 citations

    2

    h-index

  4. Molecular Ecology Resources

    1 publications · 437 citations

    1

    h-index

  5. Animal Genetics

    1 publications · 44 citations

    1

    h-index

1–5