Concepedia

Haplotype Calling

Haplotype Calling is a computational method in pharmacogenetics that determines the combination of alleles at multiple linked loci on a single chromosome, enabling the inference of phase-aware genetic variants associated with drug response.

55

Publications

5.6K

Citations

368

Authors

145

Institutions

Publications per year

2017–2026

19

Parents

Publications

55

Integrating mapping-, assembly- and haplotype-based approaches for calling variants in clinical sequencing applications

Andy Rimmer, Hang Phan, Iain Mathieson et al. · Nature Genetics · 2014 · 1.2K citations · Full text

, , +14

The diploid genome sequence of an Asian individual

Jun Wang, Wei Wang, Ruiqiang Li et al. · Nature · 2008 · 960 citations · Full text

, , +17

An E-M algorithm and testing strategy for multiple-locus haplotypes.

Jeffrey C. Long, R C Williams, Margrit Urbanek · PubMed · 1995 · 535 citations

, , +11

BCFtools/csq: haplotype-aware variant consequences

Petr Danecek, Shane McCarthy · Bioinformatics · 2017 · 504 citations · Full text

, , +17

Haplotype estimation for biobank-scale data sets

Jared O’Connell, Kevin Sharp, Nick Shrine et al. · Nature Genetics · 2016 · 254 citations · Full text

, , +11

1–5 of 55

Authors

368

  1. CK
    Cristian Koepfli

    Walter and Eliza Hall Institute of Medical Research, Australia

    3 publications · 182 citations

    3

    h-index

  2. AL
    Anita Lerch

    University of Notre Dame, United States

    3 publications · 182 citations

    3

    h-index

  3. GR
    Gualberto Ruaño

    Genomas (United States), United States

    2 publications · 37 citations

    2

    h-index

  4. TP
    Terence P. Speed

    Walter and Eliza Hall Institute of Medical Research, Australia

    2 publications · 44 citations

    2

    h-index

  5. RK
    Rui Kuang

    University of Minnesota, United States

    2 publications · 41 citations

    2

    h-index

1–5 of 368

Institutions

145

  1. University of California, Berkeley

    Berkeley, United States

    3 h-index

    6 publications

    2.9K citations

  2. National Institutes of Health

    Bethesda, United States

    3 h-index

    11 publications

    3.3K citations

  3. Wellcome Sanger Institute

    Cambridge, United Kingdom

    3 h-index

    7 publications

    4K citations

  4. University of Basel

    Basel, Switzerland

    3 h-index

    9 publications

    671 citations

  5. University of Oxford

    Oxford, United Kingdom

    3 h-index

    12 publications

    10.3K citations

  6. Swiss Tropical and Public Health Institute

    Allschwil, Switzerland

    3 h-index

    11 publications

    709 citations

  7. Yale University

    New Haven, United States

    3 h-index

    3 publications

    273 citations

  8. The Ohio State University

    Columbus, United States

    2 h-index

    2 publications

    151 citations

1–8 of 145

Venues

  1. Bioinformatics

    5 publications · 692 citations

    5

    h-index

  2. Nucleic Acids Research

    4 publications · 191 citations

    4

    h-index

  3. PubMed

    Repository · 3 publications · 571 citations

    3

    h-index

  4. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 3 publications · 57 citations

    3

    h-index

  5. BMC Genomics

    2 publications · 182 citations

    2

    h-index

1–5