79
Publications
38K
Citations
43
H-Index
2004
Active since
Shane McCarthy is an author at Wellcome Sanger Institute specializing in medicine, genetics, and genomics.
Top concepts
GeneticsMedicineGenomicsBioinformaticsNatural SciencesMolecular EcologyBiologyPopulation GeneticsFunctional GenomicsPhylogenetics
Publications per year
2004–2025
79
79
Twelve years of SAMtools and BCFtools
Petr Danecek, James Bonfield, Jennifer Liddle et al. · GigaScience · 2021 · 14.3K citations · Full text
Towards complete and error-free genome assemblies of all vertebrate species
Arang Rhie, Shane McCarthy, Olivier Fédrigo et al. · Nature · 2021 · 2.8K citations · Full text
Identifying and removing haplotypic duplication in primary genome assemblies
Dengfeng Guan, Shane McCarthy, Jonathan Wood et al. · Bioinformatics · 2020 · 2.7K citations · Full text
An integrated map of structural variation in 2,504 human genomes
Peter H. Sudmant, Tobias Rausch, Eugene J. Gardner et al. · Nature · 2015 · 2.6K citations · Full text
YaHS: yet another Hi-C scaffolding tool
Chenxi Zhou, Shane McCarthy, Richard Durbin · Bioinformatics · 2022 · 2K citations · Full text
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