Shane McCarthy - Concepedia

Author

Shane McCarthy

Also Known As

A. Reghan Foley, Alex Makunin, Chris Joyce, DNA Pipelines collective, Dorr, Marcus, Edel Sheerin, Fergal Martin, Fernando L. Mendez, Hugh Gurling, Inês Barroso

219

Publications

146.9K

Citations

H-Index

106

Concepts

All Affiliations

Wellcome Sanger Institute University of Cambridge European Bioinformatics Institute Broad Institute Harvard University

About

Shane McCarthy is an author at Wellcome Sanger Institute specializing in medicine, genetics, and genomics.

Top Concepts

#	Concept	H-Index	Publications	Citations
1	Medicine	18	21	4.3K
2	Natural Sciences	10	10	867
3	Public Health	6	6	2.1K
4	Engineering	2	2	113
5	Health Sciences	1	1	19

Shane McCarthy

Publications

38K

Citations

H-Index

Page 1

	Year	Citations
Twelve years of SAMtools and BCFtools Petr Danecek, James Bonfield, Jennifer Liddle, GigaScience	2021	14.3K
Towards complete and error-free genome assemblies of all vertebrate species Arang Rhie, Shane McCarthy, Olivier Fédrigo, Nature	2021	2.8K
Identifying and removing haplotypic duplication in primary genome assemblies Dengfeng Guan, Shane McCarthy, Jonathan Wood, Bioinformatics	2020	2.7K
An integrated map of structural variation in 2,504 human genomes Peter H. Sudmant, Tobias Rausch, Eugene J. Gardner, Nature	2015	2.6K
YaHS: yet another Hi-C scaffolding tool Chenxi Zhou, Shane McCarthy, Richard Durbin Bioinformatics	2022	2K
Reference-based phasing using the Haplotype Reference Consortium panel Po‐Ru Loh, Petr Danecek, Pier Francesco Palamara, Nature Genetics Reference-based PhasingHaplotype DeterminationGenotype-phenotype AssociationMolecular EcologyMedicine	2016	1.9K
MitoHiFi: a python pipeline for mitochondrial genome assembly from PacBio high fidelity reads Marcela Uliano‐Silva, João Gabriel R. N. Ferreira, Ksenia Krasheninnikova, BMC Bioinformatics	2023	1.6K
Insights into human genetic variation and population history from 929 diverse genomes Anders Bergström, Shane McCarthy, Ruoyun Hui, Science	2020	1K
Genetic and Pharmacologic Inactivation of ANGPTL3 and Cardiovascular Disease Frederick E. Dewey, Viktoria Gusarova, Richard L. Dunbar, New England Journal of Medicine	2017	836
Insights into hominid evolution from the gorilla genome sequence Aylwyn Scally, Julien Y. Dutheil, LaDeana W. Hillier, Nature	2012	786

Page 1