Concepedia

Gene Mention Normalization

Gene Mention Normalization is the computational task of mapping a detected gene mention in text to a unique, standardized identifier from a reference database, thereby disambiguating synonymous, ambiguous, or variant names to enable accurate integration and analysis of biological knowledge.

35

Publications

1.9K

Citations

124

Authors

63

Institutions

Publications per year

2017–2026

3

Variants

Gene Entity NormalizationGene Name Normalization

Parents

Publications

35

Evaluation of text-mining systems for biology: overview of the Second BioCreative community challenge

Martin Krallinger, Alexander A. Morgan, Larry Smith et al. · Genome biology · 2008 · 210 citations · Full text

, , +16

Overview of BioCreAtIvE task 1B: normalized gene lists

Lynette Hirschman, Marc Colosimo, Alexander A. Morgan et al. · BMC Bioinformatics · 2005 · 163 citations · Full text

, , +9

Inter-species normalization of gene mentions with GNAT

Jörg Hakenberg, Conrad Plake, Robert Leaman et al. · Bioinformatics · 2008 · 136 citations · Full text

, , +17

Gene name identification and normalization using a model organism database

Alexander A. Morgan, Lynette Hirschman, Marc Colosimo et al. · Journal of Biomedical Informatics · 2004 · 119 citations

, , +8

High-performance gene name normalization with G<scp>e</scp>N<scp>o</scp>

Joachim Wermter, Katrin Tomanek, Udo Hahn · Bioinformatics · 2009 · 102 citations · Full text

, , +17

1–5 of 35

Authors

124

  1. ZL
    Zhiyong Lu

    National Center for Biotechnology Information, United States

    5 publications · 238 citations

    5

    h-index

  2. JH
    Jörg Hakenberg

    Humboldt-Universität zu Berlin, Germany

    5 publications · 339 citations

    5

    h-index

  3. LH
    Lynette Hirschman

    Mitre (United States), United States

    5 publications · 611 citations

    5

    h-index

  4. AA
    Alexander A. Morgan

    Stanford University, United States

    4 publications · 529 citations

    4

    h-index

  5. CW
    Chih-Hsuan Wei

    National Center for Biotechnology Information, United States

    4 publications · 218 citations

    4

    h-index

1–5 of 124

Institutions

63

  1. Mitre (United States)

    Bedford, United States

    6 h-index

    17 publications

    1.7K citations

  2. Humboldt-Universität zu Berlin

    Berlin, Germany

    5 h-index

    17 publications

    1.2K citations

  3. National Center for Biotechnology Information

    Bethesda, United States

    5 h-index

    13 publications

    1K citations

  4. National Institutes of Health

    Bethesda, United States

    4 h-index

    11 publications

    220 citations

  5. Technische Universität Dresden

    Dresden, Germany

    3 h-index

    18 publications

    1.8K citations

  6. University of Edinburgh

    Edinburgh, United Kingdom

    2 h-index

    9 publications

    258 citations

  7. National Cheng Kung University

    Tainan City, Taiwan

    2 h-index

    4 publications

    350 citations

  8. Spanish National Cancer Research Centre

    Madrid, Spain

    2 h-index

    4 publications

    712 citations

1–8 of 63

Venues

  1. BMC Bioinformatics

    8 publications · 568 citations

    8

    h-index

  2. Bioinformatics

    7 publications · 477 citations

    7

    h-index

  3. PLoS ONE

    4 publications · 128 citations

    4

    h-index

  4. Genome biology

    2 publications · 232 citations

    2

    h-index

  5. Computational Systems Bioinformatics

    Conference · 1 publications · 10 citations

    1

    h-index

1–5