Concepedia

Eukaryotic Sequence Annotation

Eukaryotic Sequence Annotation is a metagenomic annotation method that specifically identifies and characterizes genomic sequences originating from eukaryotic organisms within complex environmental samples by integrating homology-based, domain-aware, and taxonomy-informed features to distinguish them from prokaryotic and other non-eukaryotic sequences.

63

Publications

19.3K

Citations

540

Authors

218

Institutions

Publications per year

2017–2026

36

Parents

Publications

63

Automated eukaryotic gene structure annotation using EVidenceModeler and the Program to Assemble Spliced Alignments

Brian J. Haas, Steven L. Salzberg, Wei Zhu et al. · Genome biology · 2008 · 4.4K citations · Full text

, , +15

CEGMA: a pipeline to accurately annotate core genes in eukaryotic genomes

Genı́s Parra, Keith Bradnam, Ian Korf · Bioinformatics · 2007 · 2.3K citations · Full text

, , +14

Ensembl 2022

Fiona Cunningham, James E. Allen, Jamie Allen et al. · Nucleic Acids Research · 2021 · 2.2K citations · Full text

, , +17

BRAKER2: automatic eukaryotic genome annotation with GeneMark-EP+ and AUGUSTUS supported by a protein database

Tomáš Brůna, Katharina J. Hoff, Alexandre Lomsadze et al. · NAR Genomics and Bioinformatics · 2021 · 1.8K citations · Full text

, , +15

NCBI Reference Sequences (RefSeq): current status, new features and genome annotation policy

Kim D. Pruitt, Tatiana Tatusova, Garth Brown et al. · Nucleic Acids Research · 2011 · 1.2K citations · Full text

, , +17

1–5 of 63

Authors

540

  1. TB
    Tomáš Brůna

    Georgia Institute of Technology, United States

    5 publications · 2.3K citations

    5

    h-index

  2. MB
    Mark Borodovsky

    Georgia Institute of Technology, United States

    5 publications · 2.4K citations

    5

    h-index

  3. CD
    Colomban de Vargas

    Centre National de la Recherche Scientifique, France

    4 publications · 859 citations

    4

    h-index

  4. PF
    Paul Flicek

    European Bioinformatics Institute, United Kingdom

    4 publications · 3.7K citations

    4

    h-index

  5. CB
    Cédric Berney

    Centre National de la Recherche Scientifique, France

    4 publications · 859 citations

    4

    h-index

1–5 of 540

Institutions

218

  1. Centre National de la Recherche Scientifique

    Paris, France

    7 h-index

    16 publications

    2.9K citations

  2. Institut de Biologia Evolutiva

    Barcelona, Spain

    5 h-index

    6 publications

    715 citations

  3. European Bioinformatics Institute

    Cambridge, United Kingdom

    5 h-index

    243 publications

    287.9K citations

  4. National Institutes of Health

    Bethesda, United States

    5 h-index

    52 publications

    16K citations

  5. Uppsala University

    Uppsala, Sweden

    5 h-index

    5 publications

    1.2K citations

  6. Georgia Institute of Technology

    Atlanta, United States

    5 h-index

    13 publications

    6.8K citations

  7. National Center for Biotechnology Information

    Bethesda, United States

    5 h-index

    48 publications

    16.6K citations

  8. The Wallace H. Coulter Department of Biomedical Engineering

    Atlanta, United States

    4 h-index

    8 publications

    4.3K citations

1–8 of 218

Venues

  1. Nucleic Acids Research

    8 publications · 5.1K citations

    8

    h-index

  2. BMC Bioinformatics

    6 publications · 504 citations

    6

    h-index

  3. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 6 publications · 343 citations

    6

    h-index

  4. Bioinformatics

    5 publications · 2.6K citations

    5

    h-index

  5. Genome Research

    GR · 4 publications · 205 citations

    4

    h-index

1–5