Concepedia

Empty Droplet Detection

Empty Droplet Detection is a computational method in single-cell RNA sequencing that identifies droplets containing no biological material by distinguishing absent or negligible gene expression from background noise.

6

Publications

1.5K

Citations

32

Authors

13

Institutions

Publications per year

2017–2026

5

Parents

Publications

6

EmptyDrops: distinguishing cells from empty droplets in droplet-based single-cell RNA sequencing data

Aaron T. L. Lun, Samantha J. Riesenfeld, Tallulah Andrews et al. · Genome biology · 2019 · 1.2K citations · Full text

, , +12

DropletQC: improved identification of empty droplets and damaged cells in single-cell RNA-seq data

Walter Muskovic, Joseph E. Powell · Genome biology · 2021 · 85 citations · Full text

, , +12

Comprehensive generation, visualization, and reporting of quality control metrics for single-cell RNA sequencing data

Rui Hong, Yusuke Koga, Shruthi Bandyadka et al. · Nature Communications · 2022 · 83 citations · Full text

, , +17

Label-free, high-throughput, electrical detection of cells in droplets

Evelien Kemna, Loes I. Segerink, Floor Wolbers et al. · The Analyst · 2013 · 67 citations

, , +17

<i>MALAT1</i> expression indicates cell quality in single-cell RNA sequencing data

Zoe A. Clarke, Gary D. Bader · bioRxiv (Cold Spring Harbor Laboratory) · 2024 · 38 citations · Full text

, , +17

1–5 of 6

Authors

32

  1. JD
    Joshua D. Campbell

    Boston University, United States

    1 publications · 83 citations

    1

    h-index

  2. FW
    Floor Wolbers

    University of Twente, Netherlands

    1 publications · 67 citations

    1

    h-index

  3. ZA
    Zoe A. Clarke

    University of Toronto, Canada

    1 publications · 38 citations

    1

    h-index

  4. AL
    Anastasia Leshchyk

    Boston University, United States

    1 publications · 83 citations

    1

    h-index

  5. WM
    Walter Muskovic

    UNSW Sydney, Australia

    1 publications · 85 citations

    1

    h-index

1–5 of 32

Institutions

13

  1. Boston University

    Boston, United States

    1 h-index

    12 publications

    996 citations

  2. Memorial Sloan Kettering Cancer Center

    New York, United States

    1 h-index

    2 publications

    2.4K citations

  3. Wellcome Sanger Institute

    Cambridge, United Kingdom

    1 h-index

    5 publications

    6.1K citations

  4. Garvan Institute of Medical Research

    Darlinghurst, Australia

    1 h-index

    2 publications

    170 citations

  5. Universidad de Salamanca

    Salamanca, Spain

    1 h-index

    3 publications

    78 citations

  6. The Kinghorn Cancer Centre

    Sydney, Australia

    1 h-index

    2 publications

    170 citations

  7. University of Toronto

    Toronto, Canada

    1 h-index

    1 publications

    38 citations

  8. Cancer Research UK Cambridge Center

    Cambridge, United Kingdom

    1 h-index

    1 publications

    1.2K citations

1–8 of 13

Venues

  1. Genome biology

    2 publications · 1.3K citations

    2

    h-index

  2. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 1 publications · 38 citations

    1

    h-index

  3. Frontiers in Bioinformatics

    1 publications · 26 citations

    1

    h-index

  4. The Analyst

    1 publications · 67 citations

    1

    h-index

  5. Nature Communications

    1 publications · 83 citations

    1

    h-index

1–5