Concepedia

Decoy Discrimination Analysis

Decoy Discrimination Analysis is a computational evaluation method in pharmacophore refinement that distinguishes active ligands from inactive decoy molecules to assess the selectivity and predictive accuracy of a pharmacophore model.

10

Publications

500

Citations

26

Authors

13

Institutions

Publications per year

2017–2026

2

Parents

Publications

10

Comparing AutoDock and Vina in Ligand/Decoy Discrimination for Virtual Screening

Tatiana F. Vieira, Sérgio F. Sousa · Applied Sciences · 2019 · 146 citations · Full text

, , +17

Membrane protein orientation and refinement using a knowledge-based statistical potential

Timothy Nugent, David T. Jones · BMC Bioinformatics · 2013 · 109 citations · Full text

, , +17

An all‐atom, distance‐dependent scoring function for the prediction of protein–DNA interactions from structure

Timothy Robertson, Gabriele Varani · Proteins Structure Function and Bioinformatics · 2006 · 58 citations

, , +12

An all‐atom knowledge‐based energy function for protein‐DNA threading, docking decoy discrimination, and prediction of transcription‐factor binding profiles

Beisi Xu, Yuedong Yang, Haojun Liang et al. · Proteins Structure Function and Bioinformatics · 2009 · 50 citations · Full text

, , +17

Application of MM/PBSA colony free energy to loop decoy discrimination: Toward correlation between energy and root mean square deviation

Federico Fogolari, Silvio C. E. Tosatto · Protein Science · 2005 · 42 citations · Full text

, , +17

1–5 of 10

Authors

26

  1. DT
    David T. Jones

    University College London, United Kingdom

    2 publications · 123 citations

    2

    h-index

  2. GV
    Gabriele Varani

    University of Washington, United States

    1 publications · 58 citations

    1

    h-index

  3. MH
    Markus H. J. Seifert

    Max Planck Institute of Biochemistry, Germany

    1 publications · 13 citations

    1

    h-index

  4. SI
    Sumaiya Iqbal

    Broad Institute, United States

    1 publications · 12 citations

    1

    h-index

  5. YZ
    Yan Zhao

    Tianjin University of Technology, China

    1 publications · 27 citations

    1

    h-index

1–5 of 26

Institutions

13

  1. University College London

    London, United Kingdom

    2 h-index

    4 publications

    246 citations

  2. University of Science and Technology of China

    Hefei, China

    1 h-index

    2 publications

    100 citations

  3. University of Washington

    Seattle, United States

    1 h-index

    2 publications

    116 citations

  4. Indiana University – Purdue University Indianapolis

    Indianapolis, United States

    1 h-index

    3 publications

    150 citations

  5. University of Udine

    Udine, Italy

    1 h-index

    1 publications

    42 citations

  6. Rede de Química e Tecnologia

    Porto, Portugal

    1 h-index

    2 publications

    292 citations

  7. Indiana University School of Medicine

    Indianapolis, United States

    1 h-index

    3 publications

    150 citations

  8. University of Padua

    Padua, Italy

    1 h-index

    1 publications

    42 citations

1–8 of 13

Venues

  1. BMC Bioinformatics

    2 publications · 123 citations

    2

    h-index

  2. Proteins Structure Function and Bioinformatics

    2 publications · 108 citations

    2

    h-index

  3. Journal of Theoretical Biology

    1 publications · 12 citations

    1

    h-index

  4. Journal of Chemical Theory and Computation

    JCTC · 1 publications · 29 citations

    1

    h-index

  5. IET Radar Sonar & Navigation

    1 publications · 27 citations

    1

    h-index

1–5