Concepedia

Dayhoff Matrices

Dayhoff Matrices is a substitution matrix used in bioinformatics that quantifies the probability of amino acid replacements over evolutionary time based on observed mutations in closely related protein sequences, derived from empirical data compiled by Margaret Dayhoff and colleagues.

15

Publications

20K

Citations

29

Authors

23

Institutions

Publications per year

2017–2026

0

Variants

Pam MatricesPoint Accepted Mutation Matrices

Parents

Publications

15

The rapid generation of mutation data matrices from protein sequences

David T. Jones, William R. Taylor, Janet M. Thornton · Computer applications in the biosciences · 1992 · 7.1K citations

, , +10

Amino acid substitution matrices from protein blocks.

Steven Henikoff, Jorja G. Henikoff · Proceedings of the National Academy of Sciences · 1992 · 6.4K citations

, , +16

An Improved General Amino Acid Replacement Matrix

Si Quang Le, Olivier Gascuel · Molecular Biology and Evolution · 2008 · 3.3K citations · Full text

, , +17

Profile analysis: detection of distantly related proteins.

Michael Gribskov, A. McLachlan, David Eisenberg · Proceedings of the National Academy of Sciences · 1987 · 1.3K citations · Full text

, , +13

Performance evaluation of amino acid substitution matrices

Steven Henikoff, Jorja G. Henikoff · Proteins Structure Function and Bioinformatics · 1993 · 453 citations

, , +15

1–5 of 15

Authors

29

  1. SH
    Steven Henikoff

    Fred Hutch Cancer Center, United States

    2 publications · 6.9K citations

    2

    h-index

  2. JG
    Jorja G. Henikoff

    Fred Hutch Cancer Center, United States

    2 publications · 6.9K citations

    2

    h-index

  3. DW
    David W. Mount

    University of Arizona, United States

    2 publications · 85 citations

    2

    h-index

  4. MG
    Michael Gribskov

    Purdue University West Lafayette, United States

    1 publications · 1.3K citations

    1

    h-index

  5. VH
    Volker Hollich

    Karolinska Institutet, Sweden

    1 publications · 128 citations

    1

    h-index

1–5 of 29

Institutions

23

  1. Howard Hughes Medical Institute

    Chevy Chase, United States

    2 h-index

    4 publications

    13.7K citations

  2. Karolinska Institutet

    Stockholm, Sweden

    1 h-index

    2 publications

    256 citations

  3. University of Regensburg

    Regensburg, Germany

    1 h-index

    3 publications

    300 citations

  4. Université de Montpellier

    Montpellier, France

    1 h-index

    2 publications

    6.6K citations

  5. Johns Hopkins Medicine

    Baltimore, United States

    1 h-index

    3 publications

    621 citations

  6. European Bioinformatics Institute

    Cambridge, United Kingdom

    1 h-index

    2 publications

    366 citations

  7. University College London

    London, United Kingdom

    1 h-index

    2 publications

    14.3K citations

  8. Universitat Autònoma de Barcelona

    Cerdanyola del Vallès, Spain

    1 h-index

    2 publications

    500 citations

1–8 of 23

Venues

  1. Proceedings of the National Academy of Sciences

    PNAS · 4 publications · 8K citations

    4

    h-index

  2. Protein Engineering Design and Selection

    PEDS · 2 publications · 622 citations

    2

    h-index

  3. Molecular Biology and Evolution

    MBE · 2 publications · 3.5K citations

    2

    h-index

  4. Proteins Structure Function and Bioinformatics

    2 publications · 553 citations

    2

    h-index

  5. Cold Spring Harbor Protocols

    2 publications · 85 citations

    2

    h-index

1–5