Concepedia

Coverage-based Assembly

Coverage-Based Assembly is a de novo assembly method that distinguishes itself by utilizing sequence coverage depth across contigs as a primary signal to resolve assembly ambiguities, guide contig extension, and partition metagenomic reads, thereby belonging to the broader class of assembly strategies that leverage read abundance information.

16

Publications

805

Citations

81

Authors

32

Institutions

Publications per year

2017–2026

5

Parents

Publications

16

Extending assembly of short DNA sequences to handle error

William R. Jeck, Josephine A. Reinhardt, David A. Baltrus et al. · Bioinformatics · 2007 · 267 citations · Full text

, , +17

MOST: a modified MLST typing tool based on short read sequencing

Rediat Tewolde, Timothy J. Dallman, Ulf Schaefer et al. · PeerJ · 2016 · 133 citations · Full text

, , +15

Generating Sequencing Depth and Coverage Map for Organelle Genomes v1

Yang Ni, Jingling Li, Chang Zhang et al. · 2023 · 74 citations · Full text

, , +17

Genomic assemblies of newly sequenced Trypanosoma cruzi strains reveal new genomic expansion and greater complexity

Francisco Callejas‐Hernández, Alberto Rastrojo, Cristina Poveda et al. · Scientific Reports · 2018 · 74 citations · Full text

, , +17

Coverage-Versus-Length Plots, a Simple Quality Control Step for <i>de Novo</i> Yeast Genome Sequence Assemblies

Alexander Douglass, Caoimhe E. O’Brien, Benjamin Offei et al. · G3 Genes Genomes Genetics · 2019 · 43 citations · Full text

, , +16

1–5 of 16

Authors

81

  1. JS
    Joachim Schnadt

    Lund University, Sweden

    1 publications · 28 citations

    1

    h-index

  2. BL
    Binbin Lai

    National Heart Lung and Blood Institute, United States

    1 publications · 22 citations

    1

    h-index

  3. SO
    Stephan Ossowski

    University of Tübingen, Germany

    1 publications · 22 citations

    1

    h-index

  4. AW
    Alissa Wiengarten

    Technical University of Munich, Germany

    1 publications · 28 citations

    1

    h-index

  5. CL
    Chang Liu

    Chinese Academy of Medical Sciences & Peking Union Medical College, China

    1 publications · 74 citations

    1

    h-index

1–5 of 81

Institutions

32

  1. University of Connecticut

    Storrs, United States

    2 h-index

    3 publications

    42 citations

  2. Academy of Medical Sciences

    London, United Kingdom

    1 h-index

    4 publications

    296 citations

  3. Universidad Autónoma de Madrid

    Madrid, Spain

    1 h-index

    5 publications

    370 citations

  4. University of North Carolina at Chapel Hill

    Chapel Hill, United States

    1 h-index

    8 publications

    2.1K citations

  5. Peking University Third Hospital

    Beijing, China

    1 h-index

    1 publications

    22 citations

  6. University College Dublin

    Dublin, Ireland

    1 h-index

    8 publications

    344 citations

  7. Fairfield University

    Fairfield, United States

    1 h-index

    2 publications

    22 citations

  8. Max Planck Institute for Plant Breeding Research

    Cologne, Germany

    1 h-index

    1 publications

    22 citations

1–8 of 32

Venues

  1. BMC Bioinformatics

    3 publications · 47 citations

    3

    h-index

  2. Bioinformatics

    3 publications · 311 citations

    3

    h-index

  3. BMC Genomics

    2 publications · 47 citations

    2

    h-index

  4. PLoS ONE

    2 publications · 36 citations

    2

    h-index

  5. G3 Genes Genomes Genetics

    1 publications · 43 citations

    1

    h-index

1–5