Concepedia

Contig Refinement

Contig Refinement is a computational process in genome sequencing informatics that improves the accuracy and continuity of assembled DNA sequences by correcting errors, resolving ambiguities, and merging overlapping contigs within a draft assembly.

15

Publications

8.4K

Citations

59

Authors

21

Institutions

Publications per year

2017–2026

2

Parents

Publications

15

<i>Consed:</i> A Graphical Tool for Sequence Finishing

David Gordon, Chris Abajian, Phil Green · Genome Research · 1998 · 3.3K citations · Full text

, , +17

Scaffolding pre-assembled contigs using SSPACE

Marten Boetzer, Christiaan V. Henkel, Hans J. Jansen et al. · Bioinformatics · 2010 · 2.5K citations · Full text

, , +16

Reordering contigs of draft genomes using the Mauve Aligner

Anna I. Rissman, Bob Mau, B. S. Biehl et al. · Bioinformatics · 2009 · 597 citations · Full text

, , +17

ABACAS: algorithm-based automatic contiguation of assembled sequences

Samuel Assefa, Thomas Keane, Thomas D. Otto et al. · Bioinformatics · 2009 · 443 citations · Full text

, , +16

A sequence assembly and editing program for efficient management of large projects

Simon Dear, Rodger Staden · Nucleic Acids Research · 1991 · 323 citations · Full text

, , +17

1–5 of 15

Authors

59

  1. CN
    Chris Newbold

    John Radcliffe Hospital, United Kingdom

    2 publications · 627 citations

    2

    h-index

  2. CL
    Chin Lung Lu

    National Tsing Hua University, Taiwan

    2 publications · 50 citations

    2

    h-index

  3. TD
    Thomas D. Otto

    Wellcome Sanger Institute, United Kingdom

    2 publications · 627 citations

    2

    h-index

  4. MB
    Matthew Berriman

    Wellcome Sanger Institute, United Kingdom

    2 publications · 627 citations

    2

    h-index

  5. YS
    Yi-Kung Shieh

    National Tsing Hua University, Taiwan

    1 publications · 36 citations

    1

    h-index

1–5 of 59

Institutions

21

  1. Wellcome Sanger Institute

    Cambridge, United Kingdom

    4 h-index

    15 publications

    4.5K citations

  2. John Radcliffe Hospital

    Oxford, United Kingdom

    2 h-index

    6 publications

    2.4K citations

  3. National Tsing Hua University

    Hsinchu, Taiwan

    2 h-index

    12 publications

    300 citations

  4. University of Washington

    Seattle, United States

    2 h-index

    4 publications

    10.2K citations

  5. University of California, Berkeley

    Berkeley, United States

    1 h-index

    1 publications

    94 citations

  6. University of Wisconsin–Madison

    Madison, United States

    1 h-index

    6 publications

    3.6K citations

  7. Georgia State University

    Atlanta, United States

    1 h-index

    1 publications

    18 citations

  8. University of Saskatchewan

    Saskatoon, Canada

    1 h-index

    1 publications

    18 citations

1–8 of 21

Venues

  1. Bioinformatics

    4 publications · 3.6K citations

    4

    h-index

  2. Genome Research

    GR · 2 publications · 3.7K citations

    2

    h-index

  3. Computer applications in the biosciences

    CABIOS · 1 publications · 299 citations

    1

    h-index

  4. Journal of the ACM

    JACM · 1 publications · 94 citations

    1

    h-index

  5. Nature Protocols

    1 publications · 184 citations

    1

    h-index

1–5