Concepedia

Cluster-based Annotation

Cluster-Based Annotation is a metagenomic annotation method that assigns functional or taxonomic labels to sequencing reads or contigs by first grouping them into discrete sequence clusters based on similarity, then propagating annotations from representative or reference sequences within each cluster to all members.

25

Publications

3.8K

Citations

97

Authors

47

Institutions

Publications per year

2017–2026

7

Parents

Publications

25

TIGR Gene Indices clustering tools (TGICL): a softwaresystem for fast clustering of large EST datasets

Geo Pertea, Xiaoqiu Huang, Liang Feng et al. · Bioinformatics · 2003 · 2K citations · Full text

, , +17

AutoAnnotate: A Cytoscape app for summarizing networks with semantic annotations

Mike Kucera, Ruth Isserlin, Arkady Arkhangorodsky et al. · F1000Research · 2016 · 400 citations · Full text

, , +12

scCATCH: Automatic Annotation on Cell Types of Clusters from Single-Cell RNA Sequencing Data

Xin Shao, Jie Liao, Xiaoyan Lu et al. · iScience · 2020 · 315 citations · Full text

, , +17

Enhancing cluster labeling using wikipedia

David Carmel, Haggai Roitman, Naama Zwerdling · 2009 · 142 citations

, , +13

EasyAlbum

Jingyu Cui, Fang Wen, Rong Xiao et al. · 2007 · 141 citations

, , +15

1–5 of 25

Authors

97

  1. MB
    Mark Blaxter

    University of Edinburgh, United Kingdom

    2 publications · 211 citations

    2

    h-index

  2. DR
    Dominik R. Laetsch

    University of Edinburgh, United Kingdom

    1 publications · 113 citations

    1

    h-index

  3. FS
    Fabrizio Sebastiani

    Istituto di Scienza e Tecnologie dell'Informazione "Alessandro Faedo", Italy

    1 publications · 12 citations

    1

    h-index

  4. JP
    John Parkinson

    Hospital for Sick Children, Canada

    1 publications · 98 citations

    1

    h-index

  5. MF
    Michael F. Ochs

    Johns Hopkins University, United States

    1 publications · 28 citations

    1

    h-index

1–5 of 97

Institutions

47

  1. University of Edinburgh

    Edinburgh, United Kingdom

    2 h-index

    5 publications

    520 citations

  2. University of California San Diego

    San Diego, United States

    1 h-index

    1 publications

    130 citations

  3. Genomics (United Kingdom)

    Oxford, United Kingdom

    1 h-index

    2 publications

    42 citations

  4. IBM Research - Haifa

    Haifa, Israel

    1 h-index

    3 publications

    426 citations

  5. Central Inland Fisheries Research Institute

    Bārākpur, India

    1 h-index

    2 publications

    40 citations

  6. Data61

    Sydney, Australia

    1 h-index

    3 publications

    57 citations

  7. Humboldt-Universität zu Berlin

    Berlin, Germany

    1 h-index

    3 publications

    273 citations

  8. Stony Brook University

    Stony Brook, United States

    1 h-index

    3 publications

    63 citations

1–8 of 47

Venues

  1. Bioinformatics

    6 publications · 2.2K citations

    6

    h-index

  2. BMC Bioinformatics

    3 publications · 249 citations

    3

    h-index

  3. PubMed

    Repository · 2 publications · 71 citations

    2

    h-index

  4. Expert Systems with Applications

    1 publications · 23 citations

    1

    h-index

  5. Genes

    1 publications · 20 citations

    1

    h-index

1–5