Concepedia

Clonal Phylogeny Inference

Clonal Phylogeny Inference is a computational method in cancer genomics that reconstructs the evolutionary lineage of tumor subclones from genomic data by distinguishing their ancestral relationships and somatic mutation acquisition patterns.

33

Publications

2.3K

Citations

246

Authors

116

Institutions

Publications per year

2017–2026

26

Parents

Publications

33

Spatial and Temporal Heterogeneity in High-Grade Serous Ovarian Cancer: A Phylogenetic Analysis

Roland F. Schwarz, Charlotte K.Y. Ng, Susanna L. Cooke et al. · PLoS Medicine · 2015 · 416 citations · Full text

, , +17

Genetic and Clonal Dissection of Murine Small Cell Lung Carcinoma Progression by Genome Sequencing

David G. McFadden, Thales Papagiannakopoulos, Amaro Taylor‐Weiner et al. · Cell · 2014 · 297 citations · Full text

, , +14

Integrative inference of subclonal tumour evolution from single-cell and bulk sequencing data

Salem Malikić, Katharina Jahn, Jack Kuipers et al. · Nature Communications · 2019 · 151 citations · Full text

, , +17

Optimizing sparse sequencing of single cells for highly multiplex copy number profiling

Timour Baslan, Jude Kendall, Brian Ward et al. · Genome Research · 2015 · 139 citations · Full text

, , +14

SiCloneFit: Bayesian inference of population structure, genotype, and phylogeny of tumor clones from single-cell genome sequencing data

Hamim Zafar, Nicholas E. Navin, Ken Chen et al. · Genome Research · 2019 · 139 citations · Full text

, , +17

1–5 of 33

Authors

246

  1. NE
    Nicholas E. Navin

    The University of Texas MD Anderson Cancer Center, United States

    4 publications · 318 citations

    4

    h-index

  2. KJ
    Katharina Jahn

    ETH Zurich, Switzerland

    3 publications · 220 citations

    3

    h-index

  3. JK
    Jack Kuipers

    ETH Zurich, Switzerland

    3 publications · 220 citations

    3

    h-index

  4. RS
    Russell Schwartz

    Carnegie Mellon University, United States

    3 publications · 107 citations

    3

    h-index

  5. NB
    Niko Beerenwinkel

    ETH Zurich, Switzerland

    3 publications · 220 citations

    3

    h-index

1–5 of 246

Institutions

116

  1. Heidelberg University

    Heidelberg, Germany

    6 h-index

    32 publications

    1.2K citations

  2. German Cancer Research Center

    Heidelberg, Germany

    6 h-index

    12 publications

    546 citations

  3. The University of Texas MD Anderson Cancer Center

    Houston, United States

    6 h-index

    14 publications

    996 citations

  4. Freie Universität Berlin

    Berlin, Germany

    5 h-index

    19 publications

    1.2K citations

  5. Humboldt-Universität zu Berlin

    Berlin, Germany

    4 h-index

    20 publications

    1.3K citations

  6. SIB Swiss Institute of Bioinformatics

    Lausanne, Switzerland

    4 h-index

    13 publications

    1.1K citations

  7. CRUK Lung Cancer Centre of Excellence

    Manchester, United Kingdom

    3 h-index

    3 publications

    178 citations

  8. London Cancer

    London, United Kingdom

    3 h-index

    3 publications

    178 citations

1–8 of 116

Venues

  1. Bioinformatics

    4 publications · 161 citations

    4

    h-index

  2. Nature Communications

    4 publications · 276 citations

    4

    h-index

  3. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 4 publications · 74 citations

    4

    h-index

  4. Scientific Reports

    2 publications · 64 citations

    2

    h-index

  5. Genome Research

    GR · 2 publications · 278 citations

    2

    h-index

1–5