Concepedia

Bead Mapping Schemes

Bead Mapping Schemes is a coarse-grained modeling methodology that systematically reduces atomic-level detail of biomolecular structures into discrete, interacting units—termed beads—by grouping atoms or residues according to predefined chemical, structural, or functional criteria, thereby enabling efficient simulation of large-scale molecular systems.

8

Publications

340

Citations

23

Authors

13

Institutions

Publications per year

2017–2026

5

Parents

Publications

8

PyCGTOOL: Automated Generation of Coarse-Grained Molecular Dynamics Models from Atomistic Trajectories

James Graham, Jonathan W. Essex, Syma Khalid · Journal of Chemical Information and Modeling · 2017 · 107 citations

, , +16

Construction of hydrodynamic bead models from high-resolution X-ray crystallographic or nuclear magnetic resonance data

Olwyn Byron · Biophysical Journal · 1997 · 93 citations · Full text

, , +16

Development of New Transferable Coarse-Grained Models of Hydrocarbons

Yaxin An, Karteek K. Bejagam, Sanket A. Deshmukh · The Journal of Physical Chemistry B · 2018 · 40 citations

, , +17

Solution Structure of Biopolymers: A New Method of Constructing a Bead Model

Ewa Banachowicz, Jacek Gapiński, A. Patkowski · Biophysical Journal · 2000 · 31 citations · Full text

, , +11

Backmapping with Mapping and Isomeric Information

Siyoung Kim · The Journal of Physical Chemistry B · 2023 · 22 citations

, , +16

1–5 of 8

Authors

23

  1. JG
    Jacek Gapiński

    Adam Mickiewicz University in Poznań, Poland

    1 publications · 31 citations

    1

    h-index

  2. WH
    W. Hampton Henley

    University of North Carolina at Chapel Hill, United States

    1 publications · 11 citations

    1

    h-index

  3. KK
    Karteek K. Bejagam

    Virginia Tech, United States

    1 publications · 40 citations

    1

    h-index

  4. SK
    Siyoung Kim

    University of Chicago, United States

    1 publications · 22 citations

    1

    h-index

  5. PS
    Pui Shan Monica Cheung

    Concordia University, Canada

    1 publications · 22 citations

    1

    h-index

1–5 of 23

Institutions

13

  1. University of North Carolina at Chapel Hill

    Chapel Hill, United States

    1 h-index

    3 publications

    33 citations

  2. National Center for Theoretical Sciences

    Taipei, Taiwan

    1 h-index

    2 publications

    44 citations

  3. University of Leicester

    Leicester, United Kingdom

    1 h-index

    1 publications

    93 citations

  4. University of Illinois Urbana-Champaign

    Urbana, United States

    1 h-index

    3 publications

    42 citations

  5. University of Southampton

    Southampton, United Kingdom

    1 h-index

    3 publications

    321 citations

  6. National Taiwan University

    Taipei, Taiwan

    1 h-index

    2 publications

    44 citations

  7. National Center for High-Performance Computing

    Hsinchu, Taiwan

    1 h-index

    1 publications

    22 citations

  8. Virginia Tech

    Blacksburg, United States

    1 h-index

    3 publications

    120 citations

1–8 of 13

Venues

  1. Biophysical Journal

    2 publications · 124 citations

    2

    h-index

  2. The Journal of Physical Chemistry B

    2 publications · 62 citations

    2

    h-index

  3. Journal of Chemical Information and Modeling

    JCIM · 1 publications · 107 citations

    1

    h-index

  4. Journal of Chemical Education

    1 publications · 22 citations

    1

    h-index

  5. The Journal of Chemical Physics

    1 publications · 14 citations

    1

    h-index

1–5