Concepedia

Base Pair Geometry

Base Pair Geometry is a structural bioinformatics construct that specifies the spatial arrangement and orientational parameters of paired nucleotide bases in nucleic acids, distinguishing it from other base pairing descriptors by quantitatively characterizing the relative position and orientation of the two bases through parameters such as shear, stretch, stagger, propeller, buckle, and opening.

111

Publications

9.5K

Citations

343

Authors

144

Institutions

Publications per year

2017–2026

6

Variants

Base Pair Parameters

Parents

Publications

111

3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures

Xiang‐Jun Lu · Nucleic Acids Research · 2003 · 1.7K citations · Full text

, , +17

Geometric nomenclature and classification of RNA base pairs

Neocles B. Leontis, Éric Westhof · RNA · 2001 · 1.1K citations · Full text

, , +17

A standard reference frame for the description of nucleic acid base-pair geometry

Wilma K. Olson, Manju Bansal, S.K. Burley et al. · Journal of Molecular Biology · 2001 · 602 citations

, , +14

Earthquake Rocking Response of Rigid Bodies

M. Aslam, William G. Godden, D.T. Scalise · Journal of the Structural Division · 1980 · 324 citations · Full text

, , +14

How many base-pairs per turn does DNA have in solution and in chromatin? Some theoretical calculations.

Michael Levitt · Proceedings of the National Academy of Sciences · 1978 · 289 citations · Full text

, , +11

1–5 of 111

Authors

343

  1. ET
    Eric T. Kool

    Stanford University, United States

    6 publications · 429 citations

    6

    h-index

  2. DB
    Dhananjay Bhattacharyya

    Saha Institute of Nuclear Physics, India

    5 publications · 187 citations

    5

    h-index

  3. DJ
    Dinshaw J. Patel

    Memorial Sloan Kettering Cancer Center, United States

    5 publications · 230 citations

    5

    h-index

  4. AM
    Abhijit Mitra

    Indian Institute of Technology Hyderabad, India

    4 publications · 142 citations

    4

    h-index

  5. WK
    Wilma K. Olson

    Rutgers, The State University of New Jersey, United States

    4 publications · 892 citations

    4

    h-index

1–5 of 343

Institutions

144

  1. Rutgers, The State University of New Jersey

    New Brunswick, United States

    6 h-index

    18 publications

    3.3K citations

  2. Stanford University

    Stanford, United States

    6 h-index

    22 publications

    1.6K citations

  3. Centre National de la Recherche Scientifique

    Paris, France

    4 h-index

    11 publications

    1.3K citations

  4. Massachusetts Institute of Technology

    Cambridge, United States

    4 h-index

    16 publications

    1.3K citations

  5. Indian Institute of Technology Hyderabad

    Sangāreddi, India

    4 h-index

    22 publications

    679 citations

  6. Saha Institute of Nuclear Physics

    Kolkata, India

    4 h-index

    18 publications

    581 citations

  7. Czech Academy of Sciences

    Prague, Czechia

    3 h-index

    9 publications

    527 citations

  8. Czech Academy of Sciences, Institute of Biophysics

    Brno, Czechia

    3 h-index

    6 publications

    253 citations

1–8 of 144

Venues

  1. Nucleic Acids Research

    10 publications · 2.2K citations

    10

    h-index

  2. Biochemistry

    10 publications · 426 citations

    10

    h-index

  3. Proceedings of the National Academy of Sciences

    PNAS · 9 publications · 817 citations

    9

    h-index

  4. Journal of Biomolecular Structure and Dynamics

    7 publications · 214 citations

    7

    h-index

  5. The Journal of Physical Chemistry B

    7 publications · 310 citations

    7

    h-index

1–5