Concepedia

Base Calling

Base Calling is the computational process of identifying nucleotide bases from raw sequencing data signals, distinguished by its role in translating analog or digital signals generated by sequencing instruments into discrete nucleotide sequences (A, T, C, G) as a foundational step in genome assembly and analysis.

98

Publications

22.4K

Citations

506

Authors

183

Institutions

Publications per year

2017–2026

29

Parents

Publications

98

Base-Calling of Automated Sequencer Traces Using<i>Phred.</i> I. Accuracy Assessment

Brent Ewing, LaDeana Hillier, Michael C. Wendl et al. · Genome Research · 1998 · 7K citations · Full text

, , +16

Base-Calling of Automated Sequencer Traces Using <i>Phred.</i> II. Error Probabilities

Brent Ewing, Phil Green · Genome Research · 1998 · 5.5K citations · Full text

, , +9

<i>Consed:</i> A Graphical Tool for Sequence Finishing

David Gordon, Chris Abajian, Phil Green · Genome Research · 1998 · 3.3K citations · Full text

, , +17

Accurate detection of m6A RNA modifications in native RNA sequences

Huanle Liu, Oguzhan Begik, Morghan C. Lucas et al. · Nature Communications · 2019 · 546 citations · Full text

, , +13

Dindel: Accurate indel calls from short-read data

Cornelis A. Albers, Gerton Lunter, Daniel G. MacArthur et al. · Genome Research · 2010 · 431 citations · Full text

, , +17

1–5 of 98

Authors

506

  1. BL
    Barry L. Karger

    Northeastern University, United States

    6 publications · 336 citations

    6

    h-index

  2. AW
    Arthur W. Miller

    Northeastern University, United States

    4 publications · 242 citations

    4

    h-index

  3. ES
    Edward S. Yeung

    Iowa State University, United States

    3 publications · 70 citations

    3

    h-index

  4. PG
    Phil Green

    University of Sheffield, United Kingdom

    3 publications · 15.9K citations

    3

    h-index

  5. MC
    Morghan C. Lucas

    Garvan Institute of Medical Research, Australia

    3 publications · 599 citations

    3

    h-index

1–5 of 506

Institutions

183

  1. Northeastern University

    Boston, United States

    6 h-index

    33 publications

    2.2K citations

  2. Iowa State University

    Ames, United States

    5 h-index

    13 publications

    319 citations

  3. University of Washington

    Seattle, United States

    4 h-index

    10 publications

    49.3K citations

  4. University of California, Berkeley

    Berkeley, United States

    4 h-index

    6 publications

    253 citations

  5. Ames National Laboratory

    Ames, United States

    3 h-index

    6 publications

    140 citations

  6. UNSW Sydney

    Sydney, Australia

    3 h-index

    11 publications

    1.9K citations

  7. St Vincent's Clinic

    Darlinghurst, Australia

    3 h-index

    12 publications

    2.4K citations

  8. Cornell University

    Ithaca, United States

    3 h-index

    3 publications

    621 citations

1–8 of 183

Venues

  1. Bioinformatics

    9 publications · 691 citations

    9

    h-index

  2. Genome Research

    GR · 8 publications · 16.5K citations

    8

    h-index

  3. Nucleic Acids Research

    7 publications · 468 citations

    7

    h-index

  4. Electrophoresis

    6 publications · 153 citations

    6

    h-index

  5. Genome biology

    5 publications · 503 citations

    5

    h-index

1–5