Concepedia

Assembly Quality Assessment

Assembly Quality Assessment is a computational method that evaluates the accuracy, completeness, and structural fidelity of genome assemblies by quantifying deviations from expected biological and technical standards within the context of diverse sequencing technologies and genome complexities.

235

Publications

62.5K

Citations

1.4K

Authors

559

Institutions

Publications per year

2017–2026

115

Parents

Publications

235

BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs

Felipe A. Simão, Robert M. Waterhouse, Panagiotis Ioannidis et al. · Bioinformatics · 2015 · 14.5K citations · Full text

, , +17

QUAST: quality assessment tool for genome assemblies

Alexey Gurevich, Vladislav Saveliev, Nikolay Vyahhi et al. · Bioinformatics · 2013 · 11.5K citations · Full text

, , +14

Merqury: reference-free quality, completeness, and phasing assessment for genome assemblies

Arang Rhie, Brian P. Walenz, Sergey Koren et al. · Genome biology · 2020 · 3.5K citations · Full text

, , +17

Towards complete and error-free genome assemblies of all vertebrate species

Arang Rhie, Shane McCarthy, Olivier Fédrigo et al. · Nature · 2021 · 3.1K citations · Full text

, , +17

BlobToolKit – Interactive Quality Assessment of Genome Assemblies

Richard Challis, E. G. Richards, Jeena Rajan et al. · G3 Genes Genomes Genetics · 2020 · 2.5K citations · Full text

, , +11

1–5 of 235

Authors

1.4K

  1. AM
    Adam M. Phillippy

    National Human Genome Research Institute, United States

    13 publications · 9K citations

    13

    h-index

  2. SK
    Sergey Koren

    National Human Genome Research Institute, United States

    10 publications · 8.5K citations

    10

    h-index

  3. MC
    Michael C. Schatz

    Johns Hopkins University, United States

    8 publications · 2.2K citations

    8

    h-index

  4. AR
    Arang Rhie

    National Human Genome Research Institute, United States

    7 publications · 7K citations

    7

    h-index

  5. KH
    Kerstin Howe

    Wellcome Sanger Institute, United Kingdom

    6 publications · 5.7K citations

    6

    h-index

1–5 of 1.4K

Institutions

559

  1. Wellcome Sanger Institute

    Cambridge, United Kingdom

    13 h-index

    83 publications

    81.7K citations

  2. University of Maryland, College Park

    College Park, United States

    11 h-index

    34 publications

    11.6K citations

  3. University of Cambridge

    Cambridge, United Kingdom

    10 h-index

    22 publications

    16.5K citations

  4. Cold Spring Harbor Laboratory

    Cold Spring Harbor, United States

    8 h-index

    24 publications

    3.9K citations

  5. University of California, Davis

    Davis, United States

    8 h-index

    26 publications

    12.5K citations

  6. National Institutes of Health

    Bethesda, United States

    8 h-index

    27 publications

    27.8K citations

  7. National Human Genome Research Institute

    Bethesda, United States

    7 h-index

    26 publications

    27.8K citations

  8. University of California, Berkeley

    Berkeley, United States

    7 h-index

    21 publications

    5.7K citations

1–8 of 559

Venues

  1. Bioinformatics

    25 publications · 30.8K citations

    23

    h-index

  2. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 15 publications · 579 citations

    13

    h-index

  3. GigaScience

    12 publications · 3K citations

    12

    h-index

  4. Genome biology

    12 publications · 5.4K citations

    12

    h-index

  5. BMC Bioinformatics

    11 publications · 680 citations

    11

    h-index

1–5