Concepedia

Assembly Completeness Evaluation

Assembly Completeness Evaluation is a methodological framework in metagenome assembly that assesses the extent to which reconstructed genomic sequences represent the complete genetic content of the microbial community under study, distinguished by its reliance on conserved marker genes, read coverage analysis, and comparative benchmarks to quantify assembly quality and potential biases.

63

Publications

29.9K

Citations

559

Authors

255

Institutions

Publications per year

2017–2026

47

Parents

Publications

63

BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs

Felipe A. Simão, Robert M. Waterhouse, Panagiotis Ioannidis et al. · Bioinformatics · 2015 · 14.5K citations · Full text

, , +17

Towards complete and error-free genome assemblies of all vertebrate species

Arang Rhie, Shane McCarthy, Olivier Fédrigo et al. · Nature · 2021 · 3.1K citations · Full text

, , +17

BUSCO Applications from Quality Assessments to Gene Prediction and Phylogenomics

Robert M. Waterhouse, Mathieu Seppey, Felipe A. Simão et al. · Molecular Biology and Evolution · 2017 · 2.5K citations · Full text

, , +17

BUSCO: Assessing Genome Assembly and Annotation Completeness

Mathieu Seppey, Mosè Manni, Evgeny M. Zdobnov · Methods in molecular biology · 2019 · 2.4K citations · Full text

, , +14

BUSCO: Assessing Genomic Data Quality and Beyond

Mosè Manni, Matthew Berkeley, Mathieu Seppey et al. · Current Protocols · 2021 · 1.3K citations · Full text

, , +17

1–5 of 63

Authors

559

  1. EM
    Evgeny M. Zdobnov

    University of Geneva, Switzerland

    7 publications · 21.5K citations

    7

    h-index

  2. MM
    Mosè Manni

    SIB Swiss Institute of Bioinformatics, Switzerland

    5 publications · 6.5K citations

    5

    h-index

  3. MS
    Mathieu Seppey

    SIB Swiss Institute of Bioinformatics, Switzerland

    5 publications · 6.5K citations

    5

    h-index

  4. RM
    Robert M. Waterhouse

    SIB Swiss Institute of Bioinformatics, Switzerland

    5 publications · 17.8K citations

    5

    h-index

  5. FA
    Felipe A. Simão

    SIB Swiss Institute of Bioinformatics, Switzerland

    4 publications · 17.3K citations

    4

    h-index

1–5 of 559

Institutions

255

  1. SIB Swiss Institute of Bioinformatics

    Lausanne, Switzerland

    9 h-index

    47 publications

    109.3K citations

  2. University of Geneva

    Geneva, Switzerland

    7 h-index

    35 publications

    108.2K citations

  3. University of California, Davis

    Davis, United States

    6 h-index

    22 publications

    10.1K citations

  4. Wellcome Sanger Institute

    Cambridge, United Kingdom

    5 h-index

    41 publications

    53.6K citations

  5. Chinese Academy of Sciences

    Beijing, China

    4 h-index

    14 publications

    3.5K citations

  6. Stanford University

    Stanford, United States

    4 h-index

    13 publications

    1.8K citations

  7. Bangor University

    Bangor, United Kingdom

    4 h-index

    4 publications

    3.5K citations

  8. University of California, Berkeley

    Berkeley, United States

    4 h-index

    16 publications

    2.2K citations

1–8 of 255

Venues

  1. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 6 publications · 518 citations

    6

    h-index

  2. Bioinformatics

    6 publications · 16.1K citations

    6

    h-index

  3. BMC Genomics

    5 publications · 736 citations

    5

    h-index

  4. Scientific Reports

    4 publications · 182 citations

    4

    h-index

  5. G3 Genes Genomes Genetics

    3 publications · 77 citations

    3

    h-index

1–5