Concepedia

Agent-based Signaling Models

Agent-Based Signaling Models is a computational modeling framework in signal transduction research that simulates intracellular signaling dynamics by representing individual molecular entities as autonomous agents with defined rules governing their interactions, localization, and state transitions, thereby capturing spatial heterogeneity, stochasticity, and emergent behaviors not readily apparent in population-averaged approaches.

27

Publications

1.1K

Citations

110

Authors

53

Institutions

Publications per year

2017–2026

6

Parents

Publications

27

Formal agent-based modelling of intracellular chemical interactions

Mark Pogson, R. H. Smallwood, Eva E. Qwarnström et al. · Biosystems · 2006 · 160 citations

, , +13

A Patient-Specific in silico Model of Inflammation and Healing Tested in Acute Vocal Fold Injury

Nicole Y. K. Li‐Jessen, Katherine Verdolini, Gilles Clermont et al. · PLoS ONE · 2008 · 120 citations · Full text

, , +15

Learning, Signaling, and Social Preferences in Public-Good Games

Marco A. Janssen, T. K. Ahn · Ecology and Society · 2006 · 78 citations · Full text

, , +17

Cellulat: an agent-based intracellular signalling model

Pedro Pablo González, David Camacho, Armando Franyuti et al. · Biosystems · 2003 · 67 citations

, , +11

Leading and trailing cells cooperate in collective migration of the zebrafish posterior lateral line primordium

Damian Dalle Nogare, Katherine Somers, Swetha Pavani Rao et al. · Development · 2014 · 66 citations · Full text

, , +17

1–5 of 27

Authors

110

  1. MH
    Mike Holcombe

    University of Sheffield, United Kingdom

    3 publications · 236 citations

    3

    h-index

  2. SM
    Shayn M. Peirce

    University of Virginia, United States

    3 publications · 91 citations

    3

    h-index

  3. MA
    Mary Ann Raymond-Stinz

    University of New Mexico, United States

    2 publications · 87 citations

    2

    h-index

  4. JA
    Jason A. Papin

    University of Virginia, United States

    2 publications · 51 citations

    2

    h-index

  5. SY
    Shujie Yang

    University of Iowa, United States

    2 publications · 87 citations

    2

    h-index

1–5 of 110

Institutions

53

  1. University of Sheffield

    Sheffield, United Kingdom

    5 h-index

    13 publications

    968 citations

  2. University of Virginia

    Charlottesville, United States

    3 h-index

    15 publications

    471 citations

  3. University of Pittsburgh

    Pittsburgh, United States

    2 h-index

    8 publications

    859 citations

  4. University of York

    York, United Kingdom

    2 h-index

    2 publications

    84 citations

  5. University of Stuttgart

    Stuttgart, Germany

    2 h-index

    6 publications

    84 citations

  6. University of New Mexico

    Albuquerque, United States

    2 h-index

    12 publications

    493 citations

  7. McGowan Institute for Regenerative Medicine

    Pittsburgh, United States

    2 h-index

    6 publications

    619 citations

  8. Stanford University

    Stanford, United States

    2 h-index

    4 publications

    80 citations

1–8 of 53

Venues

  1. BMC Systems Biology

    4 publications · 130 citations

    4

    h-index

  2. Biosystems

    2 publications · 227 citations

    2

    h-index

  3. PLoS ONE

    2 publications · 140 citations

    2

    h-index

  4. Bioinformatics

    1 publications · 19 citations

    1

    h-index

  5. Ecology and Society

    1 publications · 78 citations

    1

    h-index

1–5