Concepedia

5' End Transcript Annotation

5' End Transcript Annotation is a computational genomics method that identifies and characterizes the precise initiation sites of transcription by mapping the 5' termini of RNA transcripts to the genome, distinguishing it from general transcript annotation through its specific focus on transcription start site resolution.

17

Publications

1.3K

Citations

117

Authors

36

Institutions

Publications per year

2017–2026

3

Parents

Publications

17

5.8S-28S rRNA interaction and HMM-based ITS2 annotation

Alexander Keller, Tina Schleicher, Jörg Schultz et al. · Gene · 2008 · 427 citations

, , +12

Prominent use of distal 5′ transcription start sites and discovery of a large number of additional exons in ENCODE regions

Philipp Kapranov, Catherine Ucla, Adam Frankish et al. · Genome Research · 2007 · 207 citations · Full text

, , +17

Comprehensive comparative analysis of 5′-end RNA-sequencing methods

Xian Adiconis, Adam L. Haber, Sean Simmons et al. · Nature Methods · 2018 · 141 citations · Full text

, , +14

cRACE: a simple method for identification of the 5′ end of mRNAs

Ichiro Maruyama, Terese L. Rakow, Hiroko Maruyama · Nucleic Acids Research · 1995 · 120 citations

, , +8

Third-generation Sequencing Reveals Extensive Polycistronism and Transcriptional Overlapping in a Baculovirus

Norbert Moldován, Dóra Tombácz, Attila Szűcs et al. · Scientific Reports · 2018 · 67 citations · Full text

, , +17

1–5 of 17

Authors

117

  1. SD
    Sujit Dike

    Cold Spring Harbor Laboratory, United States

    2 publications · 219 citations

    2

    h-index

  2. TH
    Tim Hubbard

    Wellcome Sanger Institute, United Kingdom

    1 publications · 207 citations

    1

    h-index

  3. MA
    Madeline A. Lancaster

    MRC Laboratory of Molecular Biology, United Kingdom

    1 publications · 141 citations

    1

    h-index

  4. PS
    Pierluigi Strippoli

    University of Bologna, Italy

    1 publications · 11 citations

    1

    h-index

  5. JD
    Jörg Drenkow

    Cold Spring Harbor Laboratory, United States

    1 publications · 207 citations

    1

    h-index

1–5 of 117

Institutions

36

  1. University of Geneva

    Geneva, Switzerland

    2 h-index

    6 publications

    1.1K citations

  2. Howard Hughes Medical Institute

    Chevy Chase, United States

    2 h-index

    4 publications

    219 citations

  3. MRC Laboratory of Molecular Biology

    Cambridge, United Kingdom

    1 h-index

    1 publications

    141 citations

  4. Tokyo Metropolitan University

    Tokyo, Japan

    1 h-index

    8 publications

    208 citations

  5. Joint Genome Institute

    Berkeley, United States

    1 h-index

    2 publications

    106 citations

  6. Bielefeld University

    Bielefeld, Germany

    1 h-index

    5 publications

    95 citations

  7. Wadsworth Center

    Albany, United States

    1 h-index

    2 publications

    24 citations

  8. Institut National de la Recherche Scientifique

    Québec, Canada

    1 h-index

    2 publications

    24 citations

1–8 of 36

Venues

  1. Nucleic Acids Research

    4 publications · 212 citations

    4

    h-index

  2. Genome Research

    GR · 2 publications · 219 citations

    2

    h-index

  3. Scientific Reports

    1 publications · 67 citations

    1

    h-index

  4. Bioinformatics

    1 publications · 56 citations

    1

    h-index

  5. Nature Methods

    1 publications · 141 citations

    1

    h-index

1–5