Shotgun bisulphite sequencing of the Arabidopsis genome reveals DNA methylation patterning

Shawn Cokus, Suhua Feng, Xiaoyu Zhang, +7

Nature

Functional GenomicsEpigenetic ChangeGeneticsDna MethylationShotgun Bisulphite Sequencing +9

Genome-wide High-Resolution Mapping and Functional Analysis of DNA Methylation in Arabidopsis

Xiaoyu Zhang, Junshi Yazaki, Ambika Sundaresan, +8

Cell

ChromatinFunctional GenomicsMedicineGeneticsDna Methylation +10

Conservation and divergence of methylation patterning in plants and animals

Suhua Feng, Shawn Cokus, Xiaoyu Zhang, +12

Proceedings of the National Academy of Sciences

BiologyPlant BiologyAnimal GenomesGenome StudyMedicine +13

Whole-Genome Analysis of Histone H3 Lysine 27 Trimethylation in Arabidopsis

Xiaoyu Zhang, Oliver Clarenz, Shawn Cokus, +4

PLoS Biology

Relationship between nucleosome positioning and DNA methylation

Ramakrishna K. Chodavarapu, Suhua Feng, Yana V. Bernatavichute, +16

Nature

ChromatinChromatin StructureNatural SciencesGeneticsDna Methylation +8

Genome-wide analysis of mono-, di- and trimethylation of histone H3 lysine 4 in Arabidopsis thaliana

Xiaoyu Zhang, Yana V. Bernatavichute, Shawn Cokus, +2

Genome biology

Dissecting Arabidopsis thaliana DICER function in small RNA processing, gene silencing and DNA methylation patterning

Ian R. Henderson, Xiaoyu Zhang, Cheng Lu, +4

Nature Genetics

MedicineGeneticsDna MethylationNatural SciencesRna Biology +9

The SRA Methyl-Cytosine-Binding Domain Links DNA and Histone Methylation

Lianna M. Johnson, Magnolia Bostick, Xiaoyu Zhang, +4

Current Biology

ChromatinChromatin StructureChromatin RemodelingNatural SciencesEpigenetic Change +7

CHH islands: de novo DNA methylation in near-gene chromatin regulation in maize

Jonathan I. Gent, Nathanael A. Ellis, Lin Guo, +4

Genome Research

The Arabidopsis LHP1 protein colocalizes with histone H3 Lys27 trimethylation

Xiaoyu Zhang, Sophie Germann, Bartlomiej J. Blus, +3

Nature Structural & Molecular Biology

Plant Molecular BiologyChromatinChromatin StructureChromatin RemodelingMedicine +9