Shotgun bisulphite sequencing of the Arabidopsis genome reveals DNA methylation patterning

Shawn Cokus, Suhua Feng, Xiaoyu Zhang, +7

Nature

Functional GenomicsEpigenetic ChangeGeneticsDna MethylationShotgun Bisulphite Sequencing +9

Conservation and divergence of methylation patterning in plants and animals

Suhua Feng, Shawn Cokus, Xiaoyu Zhang, +12

Proceedings of the National Academy of Sciences

BiologyPlant BiologyAnimal GenomesGenome StudyMedicine +13

Coordinated regulation of Arabidopsis thaliana development by light and gibberellins

Suhua Feng, Cristina Martínez, Giuliana Gusmaroli, +11

Nature

BiologyDevelopmental BiologyBotanyNatural SciencesGenetics +7

Non-CG methylation patterns shape the epigenetic landscape in Arabidopsis

Hume Stroud, J. Truman, Jiamu Du, +5

Nature Structural & Molecular Biology

BiologyChromatinEpigenetic ChangeGeneticsDna Methylation +5

Comprehensive Analysis of Silencing Mutants Reveals Complex Regulation of the Arabidopsis Methylome

Hume Stroud, Max Greenberg, Suhua Feng, +2

Cell

Plant Molecular BiologyTranscriptional RegulationNatural SciencesGeneticsMolecular Biology +7

Genome-wide erasure of DNA methylation in mouse primordial germ cells is affected by AID deficiency

Christian Popp, Wendy Dean, Suhua Feng, +5

Nature

ChromatinDevelopmental BiologyGerm Cell FateGerm CellEpigenetic Change +9

Relationship between nucleosome positioning and DNA methylation

Ramakrishna K. Chodavarapu, Suhua Feng, Yana V. Bernatavichute, +16

Nature

ChromatinChromatin StructureNatural SciencesGeneticsDna Methylation +8

Dual Binding of Chromomethylase Domains to H3K9me2-Containing Nucleosomes Directs DNA Methylation in Plants

Jiamu Du, Xuehua Zhong, Yana V. Bernatavichute, +12

Cell

Chromomethylase DomainsChromatinPlant Molecular BiologyChromatin StructureChromatin Remodeling +13

5-Hydroxymethylcytosine is associated with enhancers and gene bodies in human embryonic stem cells

Hume Stroud, Suhua Feng, Shannon Morey Kinney, +2

Genome biology

Polymerase IV occupancy at RNA-directed DNA methylation sites requires SHH1

Julie A. Law, Jiamu Du, Christopher J. Hale, +6

Nature

ChromatinTranscriptional RegulationEpigenetic ChangeGeneticsDna Methylation +7