Using Tablet for visual exploration of second-generation sequencing data

Iain Milne, Gordon Stephen, Micha Bayer, +5

Briefings in Bioinformatics

Tablet—next generation sequence assembly visualization

Iain Milne, Micha Bayer, Linda Cardle, +4

Bioinformatics

A Simple Sequence Repeat-Based Linkage Map of Barley

Luke Ramsay, Malcolm Macaulay, Stephania degli Ivanissevich, +13

Genetics

Alternative splicing and nonsense-mediated decay modulate expression of important regulatory genes in Arabidopsis

Maria Kalyna, Craig G. Simpson, Naeem H. Syed, +10

Nucleic Acids Research

Computational and Experimental Characterization of Physically Clustered Simple Sequence Repeats in Plants

Linda Cardle, Luke Ramsay, Dan Milbourne, +3

Genetics

Resistance gene enrichment sequencing (<scp>R</scp>en<scp>S</scp>eq) enables reannotation of the <scp>NB</scp>‐<scp>LRR</scp> gene family from sequenced plant genomes and rapid mapping of resistance loci in segregating populations

Florian Jupe, Kamil Witek, Walter Verweij, +10

The Plant Journal

BiologyBioinformaticsPlant GeneticsFunctional GenomicsMolecular Ecology +13

Recent history of artificial outcrossing facilitates whole-genome association mapping in elite inbred crop varieties

Nils Rostoks, Luke Ramsay, Katrin Mackenzie, +10

Proceedings of the National Academy of Sciences

Plant GeneticsGeneticsLinkage AnalysisGenomicsPlant Genomics +16

Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress

Nils Rostoks, Sharon Mudie, Linda Cardle, +13

Molecular Genetics and Genomics

BiologyPlant GeneticsFunctional GenomicsAbiotic StressGenetics +9

Flapjack—graphical genotype visualization

Iain Milne, Paul D. Shaw, Gordon Stephen, +5

Bioinformatics

Co-ordinated gene expression during phases of dormancy release in raspberry (Rubus idaeus L.) buds

Luca Mazzitelli, Robert D. Hancock, Sophie Haupt, +9

Journal of Experimental Botany