Marta A. S. Perez

SwissDock 2024: major enhancements for small-molecule docking with Attracting Cavities and AutoDock Vina

Marine Bugnon, Ute F. Röhrig, Mathilde Goullieux et al. · Nucleic Acids Research · 2024 · 366 citations · Full text

SwissParam 2023: A Modern Web-Based Tool for Efficient Small Molecule Parametrization

Marine Bugnon, Mathilde Goullieux, Ute F. Röhrig et al. · Journal of Chemical Information and Modeling · 2023 · 220 citations · Full text

Engineering, Molecular Biology, Computational Chemistry +17

The SwissSimilarity 2021 Web Tool: Novel Chemical Libraries and Additional Methods for an Enhanced Ligand-Based Virtual Screening Experience

Maiia E. Bragina, Antoine Daina, Marta A. S. Perez et al. · International Journal of Molecular Sciences · 2022 · 137 citations · Full text

Rational Drug Discovery, Drug Target, Hit Identification +19

Machine learning predictions of MHC-II specificities reveal alternative binding mode of class II epitopes

Julien Racle, Philippe Guillaume, Julien Schmidt et al. · Immunity · 2023 · 112 citations · Full text

Sensitive identification of neoantigens and cognate TCRs in human solid tumors

Marion Arnaud, Johanna Chiffelle, Raphaël Genolet et al. · Nature Biotechnology · 2021 · 95 citations · Full text

Tumor Antigen-specific Tcrs, T-regulatory Cell, Immunology +20