Transcriptome characterization elucidates signaling networks that control human ES cell growth and differentiation

Ralph Brandenberger, Henry Wei, Sally Zhang, +11

Nature Biotechnology

Cell LineageDevelopmental BiologyCell RegulationTranscriptome CharacterizationGene Regulation +7

The homeodomain protein Cdx2 regulates lactase gene promoter activity during enterocyte differentiation

Rixun Fang, Nilda A. Santiago, Lynne C. Olds, +1

Gastroenterology

Enterocyte DifferentiationTranscriptional RegulationDevelopmental BiologySignal TransductionHomeodomain Protein Cdx2 +7

A Whole-Genome Single Nucleotide Polymorphism-Based Approach To Trace and Identify Outbreaks Linked to a Common Salmonella enterica subsp. enterica Serovar Montevideo Pulsed-Field Gel Electrophoresis Type

Henk C. den Bakker, Andrea I. Moreno‐Switt, Craig Cummings, +14

Applied and Environmental Microbiology

Identify Outbreaks LinkedMolecular EpidemiologyPathogen DetectionHuman IsolatesFood Microbiology +16

GATA family transcription factors activate lactase gene promoter in intestinal Caco-2 cells

Rixun Fang, Lynne C. Olds, Nilda A. Santiago, +1

American Journal of Physiology-Gastrointestinal and Liver Physiology

Transcriptional RegulationSignal TransductionMolecular PhysiologyGata FamilyProtein Expression +12

Escherichia coli Serotype O55:H7 Diversity Supports Parallel Acquisition of Bacteriophage at Shiga Toxin Phage Insertion Sites during Evolution of the O157:H7 Lineage

Jennifer L. Kyle, Craig Cummings, Craig T. Parker, +15

Journal of Bacteriology

Spatio-temporal patterns of intestine-specific transcription factor expression during postnatal mouse gut development

Rixun Fang, Lynne C. Olds, Eric Sibley

Gene Expression Patterns

Cell LineageFunctional GenomicsDevelopmental BiologyGut-organ AxisDigestive Tract +5

<i>Pdx1</i>inactivation restricted to the intestinal epithelium in mice alters duodenal gene expression in enterocytes and enteroendocrine cells

Chin Chen, Rixun Fang, Corrine R. Davis, +2

American Journal of Physiology-Gastrointestinal and Liver Physiology

Immune RegulationGastroenterologyPathologyDigestive TractIntestinal Epithelium +18

Accurate, rapid and high-throughput detection of strain-specific polymorphisms in Bacillus anthracis and Yersinia pestis by next-generation sequencing

Craig Cummings, Christina A. Bormann Chung, Rixun Fang, +12

Investigative Genetics

Genomic characterization of Salmonella Cerro ST367, an emerging Salmonella subtype in cattle in the United States

Lorraine D. Rodriguez‐Rivera, Andrea I. Moreno‐Switt, Lovorka Degoricija, +5

BMC Genomics

Transcriptional regulation of the lactase-phlorizin hydrolase promoter by PDX-1

Zhi Wang, Rixun Fang, Lynne C. Olds, +1

American Journal of Physiology-Gastrointestinal and Liver Physiology

Proximal DuodenumTranscriptional RegulationProtein ExpressionBiochemistryNatural Sciences +9