Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray

Tetsuya S. Tanaka, Saied A. Jaradat, Meng K. Lim, +11

Proceedings of the National Academy of Sciences

Cdna Microarray TechnologyGeneticsGene Expression ProfilingEpigeneticsEmbryology +15

Transcriptome signature of cellular senescence

Gabriel Casella, Rachel Munk, Kyoung Mi Kim, +4

Nucleic Acids Research

HuR and GRSF1 modulate the nuclear export and mitochondrial localization of the lncRNA<i>RMRP</i>

Ji Heon Noh, Kyoung Mi Kim, Kotb Abdelmohsen, +16

Genes & Development

Transcriptional RegulationSystems BiologyNuclear ExportEngineeringMitochondrial Function +13

Uncovering Early Response of Gene Regulatory Networks in ESCs by Systematic Induction of Transcription Factors

Akira Nishiyama, Xin Li, Alexei A. Sharov, +30

Cell stem cell

Systems BiologyFunctional GenomicsEarly ResponseEngineeringGenetics +13

High-purity circular RNA isolation method (RPAD) reveals vast collection of intronic circRNAs

Amaresh C. Panda, Supriyo De, Ioannis Grammatikakis, +6

Nucleic Acids Research

EngineeringGeneticsRna SplicingMolecular BiologyCircrna Functions +19

Transcriptome Analysis of Mouse Stem Cells and Early Embryos

Alexei A. Sharov, Yulan Piao, Ryo Matoba, +36

PLoS Biology

GeneticsAdult Stem CellTranscriptomics TechnologyGene Expression ProfilingEpigenetics +15

BAF250B-Associated SWI/SNF Chromatin-Remodeling Complex Is Required to Maintain Undifferentiated Mouse Embryonic Stem Cells

Zhijiang Yan, Zhong Wang, Lioudmila V. Sharova, +7

Stem Cells

Identification of Pou5f1, Sox2, and Nanog downstream target genes with statistical confidence by applying a novel algorithm to time course microarray and genome-wide chromatin immunoprecipitation data

Alexei A. Sharov, Shinji Masui, Lioudmila V. Sharova, +6

BMC Genomics

Essential Role of Chromatin Remodeling Protein Bptf in Early Mouse Embryos and Embryonic Stem Cells

Joseph W. Landry, Alexei A. Sharov, Yulan Piao, +10

PLoS Genetics

Early Mouse EmbryosGeneticsCell SpecializationEpigeneticsEmbryology +23

Comparative transcriptome analysis of embryonic and adult stem cells with extended and limited differentiation capacity

Fernando Ulloa‐Montoya, Benjamin L. Kidder, Karen Pauwelyn, +9

Genome biology