MAP-RSeq: Mayo Analysis Pipeline for RNA sequencing

Krishna R. Kalari, Asha Nair, Jaysheel Bhavsar, +12

BMC Bioinformatics

Glis1 facilitates induction of pluripotency via an epigenome–metabolome–epigenome signalling cascade

Linpeng Li, Keshi Chen, Tianyu Wang, +20

Nature Metabolism

Epigenome–metabolome–epigenome Signalling CascadeTranscriptional RegulationSignal TransductionDevelopmental BiologySignaling Pathway +8

Measure transcript integrity using RNA-seq data

Liguo Wang, Jinfu Nie, Hugues Sicotte, +11

BMC Bioinformatics

RNA Toxicity and Missplicing in the Common Eye Disease Fuchs Endothelial Corneal Dystrophy

Jintang Du, Ross A. Aleff, Elisabetta Soragni, +9

Journal of Biological Chemistry

A Resource for Inactivation of MicroRNAs Using Short Tandem Target Mimic Technology in Model and Crop Plants

Ting Peng, Mengmeng Qiao, Haiping Liu, +26

Molecular Plant

EngineeringCrop PlantsGeneticsSynthetic BiologyGenetic Engineering +9

JMJD3 and UTX determine fidelity and lineage specification of human neural progenitor cells

Yongli Shan, Yanqi Zhang, Yuan Zhao, +24

Nature Communications

Aberrant signature methylome by DNMT1 hot spot mutation in hereditary sensory and autonomic neuropathy 1E

Zhifu Sun, Yanhong Wu, Tamás Ördög, +7

Epigenetics

Mitolysosome exocytosis, a mitophagy-independent mitochondrial quality control in flunarizine-induced parkinsonism-like symptoms

Feixiang Bao, Lingyan Zhou, Rui Zhou, +31

Science Advances

PuHox52‐mediated hierarchical multilayered gene regulatory network promotes adventitious root formation in <i>Populus ussuriensis</i>

Ming Wei, Quangang Liu, Zhanchao Wang, +12

New Phytologist

GeneticsMolecular GeneticsGene Regulatory NetworkPlant DevelopmentHealth Sciences +14

Plin2-mediated lipid droplet mobilization accelerates exit from pluripotency by lipidomic remodeling and histone acetylation

Yi Wu, Keshi Chen, Linpeng Li, +17

Cell Death and Differentiation

Molecular PhysiologyMedicineLipid ScienceLipidomic RemodelingPharmacology +4