Siddhartha Jain

Using neural networks for reducing the dimensions of single-cell RNA-Seq data

Chieh Hubert Lin, Siddhartha Jain, Hannah Kim et al. · Nucleic Acids Research · 2017 · 220 citations · Full text

Life Sciences, Bioinformatics, Cell Biology +16

Transcriptional regulatory model of fibrosis progression in the human lung

John E. McDonough, Farida Ahangari, Qin Li et al. · JCI Insight · 2019 · 184 citations · Full text

Life Sciences, Molecular Biology, Systems Biology +17

Innate transcriptional effects by adjuvants on the magnitude, quality, and durability of HIV envelope responses in NHPs

Joseph R. Francica, Daniel E. Zak, Caitlyn Linde et al. · Blood Advances · 2017 · 93 citations · Full text

Life Sciences, Immunology, Infectious Diseases +14

Computationally Optimized SARS-CoV-2 MHC Class I and II Vaccine Formulations Predicted to Target Human Haplotype Distributions

Ge Liu, Brandon Carter, Trenton Bricken et al. · Cell Systems · 2020 · 78 citations · Full text

Life Sciences, Bioinformatics, Immunology +16

Code-Aware Prompting: A Study of Coverage-Guided Test Generation in Regression Setting using LLM

Gabriel Ryan, Siddhartha Jain, Mingyue Shang et al. · Proceedings of the ACM on software engineering. · 2024 · 69 citations

Computing, Computer Science, Software Engineering +12