Dynamic m6A mRNA methylation directs translational control of heat shock response

Jun Zhou, Ji Wan, Xiangwei Gao, +3

Nature

Transcriptional RegulationHeat Shock ResponseNatural SciencesRna BiologyMolecular Biology +8

Clustering single-cell RNA-seq data with a model-based deep learning approach

Tian Tian, Ji Wan, Qi Song, +1

Nature Machine Intelligence

BioinformaticsSingle Cell SequencingMedicineNatural SciencesRna Structure Prediction +9

Structure and activity of putative intronic miRNA promoters

Alex Mas Monteys, Ryan M. Spengler, Ji Wan, +4

RNA

N6-Methyladenosine Guides mRNA Alternative Translation during Integrated Stress Response

Jun Zhou, Ji Wan, Xin Shu, +6

Molecular Cell

Natural SciencesRna BiologyMolecular BiologyGene ExpressionTranscription Regulation +2

Quantitative profiling of initiating ribosomes in vivo

Xiangwei Gao, Ji Wan, Botao Liu, +3

Nature Methods

MedicineRna Structure PredictionRna BiologyQuantitative ProfilingProteomics +2

m6A Facilitates eIF4F-Independent mRNA Translation

Ryan Alex Coots, Xiaomin Liu, Yuanhui Mao, +5

Molecular Cell

Transcriptional RegulationTranslational BiologyRna BiologyEif4f-independent Mrna TranslationGene Expression +4

Transcriptome-wide analyses of CstF64–RNA interactions in global regulation of mRNA alternative polyadenylation

Chengguo Yao, Jacob Biesinger, Ji Wan, +4

Proceedings of the National Academy of Sciences

Fip1 regulates mRNA alternative polyadenylation to promote stem cell self-renewal

Brad Lackford, Chun Yao, G. M. Charles, +11

The EMBO Journal

Stem Cell BiologyTranscriptional RegulationLineage PlasticityDevelopmental BiologyMedicine +7

Genome-Wide Determination of a Broad ESRP-Regulated Posttranscriptional Network by High-Throughput Sequencing

Kimberly A. Dittmar, Peng Jiang, Juw Won Park, +5

Molecular and Cellular Biology

GeneticsRna SplicingMolecular BiologyGenomicsHigh Throughput Sequencing +24

TISdb: a database for alternative translation initiation in mammalian cells

Ji Wan, Shu‐Bing Qian

Nucleic Acids Research

Translation Initiation SiteGeneticsTranscriptomics TechnologyGenomicsGene Structure +14