Chromatin Interaction Analysis with Paired-End Tag (ChIA-PET) sequencing technology and application

Guoliang Li, Liuyang Cai, Huidan Chang, +4

BMC Genomics

Digestion-ligation-only Hi-C is an efficient and cost-effective method for chromosome conformation capture

Da Lin, Ping Hong, Siheng Zhang, +9

Nature Genetics

Cost-effective MethodChromatinMolecular Biological MethodDigestion-ligation-only Hi-cGenetics +10

The effects of Arabidopsis genome duplication on the chromatin organization and transcriptional regulation

Hui Zhang, Ruiqin Zheng, Yunlong Wang, +3

Nucleic Acids Research

Histone ModificationsPlant GeneticsAutotetraploid ArabidopsisGeneticsGenomics +15

MiR-214-3p attenuates cognition defects via the inhibition of autophagy in SAMP8 mouse model of sporadic Alzheimer's disease

Yueqi Zhang, Qiliang Li, Chengeng Liu, +4

NeuroToxicology

Cell AutophagyMitophagyAlzheimer's DiseaseMolecular NeuroscienceSporadic Alzheimer +8

MiR-299-5p regulates apoptosis through autophagy in neurons and ameliorates cognitive capacity in APPswe/PS1dE9 mice

Yueqi Zhang, Chengeng Liu, Jinling Wang, +4

Scientific Reports

MitophagyApoptosisCell DeathAd MiceAutophagy Inhibitor +16

HPV-CCDC106 integration alters local chromosome architecture and hijacks an enhancer by three-dimensional genome structure remodeling in cervical cancer

Canhui Cao, Ping Hong, Xingyu Huang, +24

Journal of genetics and genomics/Journal of Genetics and Genomics

Three-dimensional Genome StructureMolecular BiologyPathologyEpigeneticsCancer-associated Virus +15

Takotsubo cardiomyopathy (left ventricular ballooning syndrome) induced during dobutamine stress echocardiography

John Silberbauer, Ping Hong, Guy Lloyd

European Journal of Echocardiography

75-Year-old WomanCardiomyopathyHeart FailureTakotsubo CardiomyopathyStructural Heart Disease +13

Chromatin Interaction Analysis with Updated ChIA-PET Tool (V3)

Guoliang Li, Tongkai Sun, Huidan Chang, +3

Genes

GeneticsMolecular BiologyGenomicsBioinformatics DatabaseEpigenetics +20

Decoding the spatial chromatin organization and dynamic epigenetic landscapes of macrophage cells during differentiation and immune activation

Da Lin, Weize Xu, Ping Hong, +25

Nature Communications

Flavonoid biosynthesis controls fiber color in naturally colored cotton

Haifeng Liu, Cheng Luo, Song Wu, +14

PeerJ