Large-scale ruminant genome sequencing provides insights into their evolution and distinct traits

Lei Chen, Qiang Qiu, Yu Jiang, +49

Science

CNVcaller: highly efficient and widely applicable software for detecting copy number variations in large populations

Xihong Wang, Zhuqing Zheng, Yudong Cai, +4

GigaScience

A sheep pangenome reveals the spectrum of structural variations and their effects on tail phenotypes

Ran Li, Mian Gong, Xinmiao Zhang, +32

Genome Research

Building a sequence map of the pig pan-genome from multiple de novo assemblies and Hi-C data

Xiaomeng Tian, Ran Li, Weiwei Fu, +10

Science China Life Sciences

BiologyHi-c DataLong-read SequencingSequence MapPig Pan-genome +9

De Novo Assembly of 20 Chicken Genomes Reveals the Undetectable Phenomenon for Thousands of Core Genes on Microchromosomes and Subtelomeric Regions

Ming Li, Congjiao Sun, Naiyi Xu, +27

Molecular Biology and Evolution

BGVD: An Integrated Database for Bovine Sequencing Variations and Selective Signatures

Ningbo Chen, Weiwei Fu, Jianbang Zhao, +7

Genomics Proteomics & Bioinformatics

RGD v2.0: a major update of the ruminant functional and evolutionary genomics database

Weiwei Fu, Rui Wang, Hojjat Asadollahpour Nanaei, +3

Nucleic Acids Research

Ancient Genomes Reveal the Evolutionary History and Origin of Cashmere-Producing Goats in China

Yudong Cai, Weiwei Fu, Dawei Cai, +20

Molecular Biology and Evolution

GeneticsGenomicsReproductive BiologyDomesticationAnimal Genetics +18

Towards the Complete Goat Pan-Genome by Recovering Missing Genomic Segments From the Reference Genome

Ran Li, Weiwei Fu, Rui Su, +10

Frontiers in Genetics

An atlas of CNV maps in cattle, goat and sheep

Yongzhen Huang, Yunjia Li, Xihong Wang, +21

Science China Life Sciences

Animal StudyCartographyCnv MapsCaprineAnimal Science +4