Large-scale genome-wide association study of coronary artery disease in genetically diverse populations

Catherine Tcheandjieu, Xiang Zhu, Austin T. Hilliard, +57

Nature Medicine

Genome-wide Association StudyGenetic DeterminantDiverse PopulationsCardiovascular EpidemiologyGenotype-phenotype Association +9

Integrated functional genomic analyses of Klinefelter and Turner syndromes reveal global network effects of altered X chromosome dosage

Xianglong Zhang, David S. Hong, Shining Ma, +10

Proceedings of the National Academy of Sciences

Immunogenicity of recombinant<i>Lactobacillus casei</i>-expressing F4 (K88) fimbrial adhesin FaeG in conjunction with a heat-labile enterotoxin A (LTAK63) and heat-labile enterotoxin B (LTB) of enterotoxigenic<i>Escherichia coli</i>as an oral adjuvant in mice

Mei Yu, Ruomei Qi, Cheng Chen, +9

Journal of Applied Microbiology

Accurate inference of isoforms from multiple sample RNA-Seq data

Masruba Tasnim, Shining Ma, Ei-Wen Yang, +2

BMC Genomics

Network Effects of the 15q13.3 Microdeletion on the Transcriptome and Epigenome in Human-Induced Neurons

Siming Zhang, Xianglong Zhang, Carolin Purmann, +10

Biological Psychiatry

Gene Deletion DataNetwork EffectsMolecular NeuroscienceHuman-induced NeuronsMedicine +10

Differential regulation enrichment analysis via the integration of transcriptional regulatory network and gene expression data

Shining Ma, Tao Jiang, Rui Jiang

Bioinformatics

Model-Based Approach to the Joint Analysis of Single-Cell Data on Chromatin Accessibility and Gene Expression

Zhixiang Lin, Mahdi Zamanighomi, Timothy Daley, +2

Statistical Science

GeneticsModel-based ApproachIntegrative AnalysisChromatin AccessibilityGene Expression Profiling +21

Construction and Analysis of Functional Networks in the Gut Microbiome of Type 2 Diabetes Patients

Lianshuo Li, Zicheng Wang, Peng He, +3

Genomics Proteomics & Bioinformatics

DysbiosisEngineeringGeneticsNetwork AnalysisFunctional Networks +22

NeuronMotif: Deciphering cis-regulatory codes by layer-wise demixing of deep neural networks

Wei Zheng, Kui Hua, Lei Wei, +6

Proceedings of the National Academy of Sciences

Leveraging cell-type-specific regulatory networks to interpret genetic variants in abdominal aortic aneurysm

Shining Ma, Xi Chen, Xiang Zhu, +2

Proceedings of the National Academy of Sciences