Jie Tan

PPR-Meta: a tool for identifying phages and plasmids from metagenomic fragments using deep learning

Zhencheng Fang, Jie Tan, Shu‐Fang Vivienne Wu et al. · GigaScience · 2019 · 191 citations · Full text

UNSUPERVISED FEATURE CONSTRUCTION AND KNOWLEDGE EXTRACTION FROM GENOME-WIDE ASSAYS OF BREAST CANCER WITH DENOISING AUTOENCODERS

Jie Tan, Matthew Ung, Chao Cheng et al. · 2014 · 171 citations · Full text

ADAGE-Based Integration of Publicly Available Pseudomonas aeruginosa Gene Expression Data with Denoising Autoencoders Illuminates Microbe-Host Interactions

Jie Tan, John H. Hammond, Deborah A. Hogan et al. · mSystems · 2016 · 135 citations · Full text

Cross-platform normalization of microarray and RNA-seq data for machine learning applications

Jeffrey Thompson, Jie Tan, Casey S. Greene · PeerJ · 2016 · 100 citations · Full text

Engineering, Machine Learning, Transcriptomics Technology +20

Unsupervised Extraction of Stable Expression Signatures from Public Compendia with an Ensemble of Neural Networks

Jie Tan, Georgia Doing, Kimberley A. Lewis et al. · Cell Systems · 2017 · 100 citations · Full text

Artificial Intelligence, Cross-experiment Comparisons, Machine Learning +26