Hybrid metagenomic assembly enables high-resolution analysis of resistance determinants and mobile elements in human microbiomes

Denis Bertrand, Jim Shaw, Manesh Kalathiyappan, +14

Nature Biotechnology

Antimicrobial Resistance GeneMobile ElementsHybrid Metagenomic AssemblyResistance DeterminantsGenomics +6

Whole metagenome profiling reveals skin microbiome-dependent susceptibility to atopic dermatitis flare

Kern Rei Chng, Angeline Su Ling Tay, Chenhao Li, +19

Nature Microbiology

InflammationDysbiosisMicrobiome-dependent SusceptibilityAtopic DermatitisPathogenesis +7

Critical Assessment of Metagenome Interpretation: the second round of challenges

Fernando Meyer, Adrian Fritz, Zhi-Luo Deng, +100

Nature Methods

Genus-Wide Comparative Genomics of Malassezia Delineates Its Phylogeny, Physiology, and Niche Adaptation on Human Skin

Guangxi Wu, He Zhao, Chenhao Li, +21

PLoS Genetics

Malassezia DelineatesGeneticsNiche AdaptationGenomicsDermatology +19

Cartography of opportunistic pathogens and antibiotic resistance genes in a tertiary hospital environment

Kern Rei Chng, Chenhao Li, Denis Bertrand, +107

Nature Medicine

Gut microbiome and metabolome profiling in Framingham heart study reveals cholesterol-metabolizing bacteria

Chenhao Li, Martin Stražar, Ahmed M. Mohamed, +23

Cell

ProbioticDysbiosisMedicineMicrobiotaGut Microbiology +10

INC-Seq: accurate single molecule reads using nanopore sequencing

Chenhao Li, Kern Rei Chng, Esther J. H. Boey, +3

GigaScience

Metagenome-wide association analysis identifies microbial determinants of post-antibiotic ecological recovery in the gut

Kern Rei Chng, Tarini Shankar Ghosh, Yi Han Tan, +14

Nature Ecology & Evolution

DysbiosisMedicineGut MicrobiologyGut-organ AxisMicrobial Ecology +6

Regulation of seminiferous tubule-associated stem Leydig cells in adult rat testes

Xiaoheng Li, Zhao Wang, Zhenming Jiang, +10

Proceedings of the National Academy of Sciences

Ultra‐Narrow‐Bandwidth Deep‐Red Electroluminescence Based on Green Plant‐Derived Carbon Dots

Renjing Chen, Zhibin Wang, Tao Pang, +8

Advanced Materials

Materials ScienceWhite OledSolid-state LightingEngineeringPhotoluminescence +10