Migun Shakya

A comprehensive benchmarking study of protocols and sequencing platforms for 16S rRNA community profiling

R. D'Amore, Umer Zeeshan Ijaz, Melanie Schirmer et al. · BMC Genomics · 2016 · 410 citations · Full text

A Multifactor Analysis of Fungal and Bacterial Community Structure in the Root Microbiome of Mature Populus deltoides Trees

Migun Shakya, Neil Gottel, Hector F. Castro et al. · PLoS ONE · 2013 · 305 citations · Full text

Biology, Microbial Diversity, Multifactor Analysis +15

Comparative metagenomic and <scp>rRNA</scp> microbial diversity characterization using archaeal and bacterial synthetic communities

Migun Shakya, Christopher Quince, James H. Campbell et al. · Environmental Microbiology · 2013 · 200 citations · Full text

Standardized phylogenetic and molecular evolutionary analysis applied to species across the microbial tree of life

Migun Shakya, Sanaa Ahmed, Karen W. Davenport et al. · Scientific Reports · 2020 · 129 citations · Full text

Hi-C deconvolution of a human gut microbiome yields high-quality draft genomes and reveals plasmid-genome interactions

Maximilian O. Press, Andrew Wiser, Zev Kronenberg et al. · 2017 · 108 citations · Full text

Reveals Plasmid-genome Interactions, Dysbiosis, Genetics +21