Li C. Xue

PRODIGY: a web server for predicting the binding affinity of protein–protein complexes

Li C. Xue, João Rodrigues, Panagiotis L. Kastritis et al. · Bioinformatics · 2016 · 1.3K citations · Full text

Large-scale prediction of binding affinity in protein–small ligand complexes: the PRODIGY-LIG web server

Anna Vangone, Jörg Schaarschmidt, Panagiotis I. Koukos et al. · Bioinformatics · 2018 · 247 citations · Full text

Prediction of homoprotein and heteroprotein complexes by protein docking and template‐based modeling: A CASP‐CAPRI experiment

Marc F. Lensink, Sameer Velankar, Andriy Kryshtafovych et al. · Proteins Structure Function and Bioinformatics · 2016 · 163 citations · Full text

Structural Bioinformatics, Biomolecular Structure Prediction, Molecular Biology +17

DeepRank-GNN: a graph neural network framework to learn patterns in protein–protein interfaces

Manon Réau, Nicolas Renaud, Li C. Xue et al. · Bioinformatics · 2022 · 159 citations · Full text

Performance of HADDOCK and a simple contact-based protein–ligand binding affinity predictor in the D3R Grand Challenge 2

Zeynep Kurkcuoglu, Panagiotis I. Koukos, Nevia Citro et al. · Journal of Computer-Aided Molecular Design · 2017 · 138 citations · Full text