GenomeScope: fast reference-free genome profiling from short reads

Gregory W. Vurture, Fritz J. Sedlazeck, Maria Nattestad, +4

Bioinformatics

KBase: The United States Department of Energy Systems Biology Knowledgebase

Adam P. Arkin, Robert W. Cottingham, Christopher S. Henry, +78

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The pineapple genome and the evolution of CAM photosynthesis

Ray Ming, Robert VanBuren, Ching Man Wai, +67

Nature Genetics

Oxford Nanopore sequencing, hybrid error correction, and de novo assembly of a eukaryotic genome

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Whole genome de novo assemblies of three divergent strains of rice, Oryza sativa, document novel gene space of aus and indica

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Genome biology

Complex rearrangements and oncogene amplifications revealed by long-read DNA and RNA sequencing of a breast cancer cell line

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Genome Research

Whole genome de novo assemblies of three divergent strains of rice, Oryza sativa , document novel gene space of aus and indica

Michael C. Schatz, Lyza Maron, Joshua C. Stein, +12

Genome Biology

BiologyPlant GeneticsComparative GenomicsGeneticsNovo Assemblies +7

Third-generation sequencing and the future of genomics

Hayan Lee, James Gurtowski, Shinjae Yoo, +5

GeneticsBp MoleculesMolecular BiologyBp ReadsGenomics +16

Error correction and assembly complexity of single molecule sequencing reads

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EngineeringSingle Molecule SequencingMolecular BiologySmall GenomesGenomics +19

GenomeScope: Fast reference-free genome profiling from short reads

Gregory W. Vurture, Fritz J. Sedlazeck, Maria Nattestad, +4

Abstract Summary GenomescopeGeneticsGenomicsShort ReadsHigh Throughput Sequencing +16